Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00334 ATGGACTCGGAATCTTCAATCTCCGATTCTCAACAGCACCCTCTCTCGAACCCAATCGACGACGCGTGCCACGACATGAGTTCCCTAGAAGACCTCGCGAACCGTGGCGCGTGGCGTTCCATCATCGACAAGGTCTCACGCGCCCGCGCCCTCTCTCTCCTCCACAAGCCCCACGACCATCTCACCTACCTCGCCTTCAACGCCCTCGCCTTCACTAAACTCCGTCGTTTCAACGAAGCCTCCGCCGAACTCGATTCCCTCGAAGACCTTGACAGTTCCCACTACCGCTACGAAACCTACCCCAAAATCTACCCCAACCGGGTCGGATCCATGGTCCCTTTCTCCCTCCGGTGGCTCAACGCCCTAATCCCCATCAAATTAGGGCAACGCCAGCAAGGCATGGATCGCTTCTACACTCTCCTCGATTTCGTGCGTGGGAAGATTAAGGAAAAGGAAAAACACAACAACCTCGGTGTCTCCCTTAATCTGTGGAGAAAACGTGAGGTTTTTGTCGTGAATTGCATCATAGGGCACCATTTGAGTCAGAAAGAGTTTGGGGTGTGTATGAGTTTAATGAAGGAGCTTCTCTCTCGCGACTGTTCTGACCCTTTGCTGGTTTCGCAACTTGGGTACATGCAGTTGCAGATTGGGGACTTGGAGGGTGCGAAAGTTTCGTTTTTGAAGGTGGAGGAGTTGGGGAAGAGTAATGGGTCGTTGAGCGAGGTTGAGTTTAGGAACCTTGTGAATAGGAACAAGGCGTTGGTGTATTTGGTTGGGAAGGATTATGTGTCGGCGGTGAGGGAGTACGAGGAGTGCATTGAGAGGGACAGTGCGGATGTTGTGGCTGTCAATAACAAGGCTCTGTGTTTGATGTATCTTAGGGATTTGTCGGATTCCATTAAGGTGTTGGAGAGTGCGCTTGAGAGAGTTCCCACTGTGGCTCTCAACGAGACGCTTGTTGTCAATTTGTGTAGTATGTACGAGTTGGCGTATGTTAATCACTCTGATATTAAGAGAACGCTTAGTAGTTGGATTGCTCGTGTTGCCCCTGATGACTTTGATGCATCCTGTACTCGTACATGA 1083 0.5088 MDSESSISDSQQHPLSNPIDDACHDMSSLEDLANRGAWRSIIDKVSRARALSLLHKPHDHLTYLAFNALAFTKLRRFNEASAELDSLEDLDSSHYRYETYPKIYPNRVGSMVPFSLRWLNALIPIKLGQRQQGMDRFYTLLDFVRGKIKEKEKHNNLGVSLNLWRKREVFVVNCIIGHHLSQKEFGVCMSLMKELLSRDCSDPLLVSQLGYMQLQIGDLEGAKVSFLKVEELGKSNGSLSEVEFRNLVNRNKALVYLVGKDYVSAVREYEECIERDSADVVAVNNKALCLMYLRDLSDSIKVLESALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDASCTRT 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00334 360 SUPERFAMILY TPR-like 193 314 IPR011990 GO:0005515
Pumo1g00334 360 MobiDBLite consensus disorder prediction 1 20 - -
Pumo1g00334 360 MobiDBLite consensus disorder prediction 1 17 - -
Pumo1g00334 360 SMART tpr_5 203 236 IPR019734 GO:0005515
Pumo1g00334 360 SMART tpr_5 280 313 IPR019734 GO:0005515
Pumo1g00334 360 SMART tpr_5 246 279 IPR019734 GO:0005515
Pumo1g00334 360 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 10 358 - -
Pumo1g00334 360 FunFam Trafficking protein particle complex subunit 12 171 342 - -
Pumo1g00334 360 Gene3D Tetratricopeptide repeat domain 27 339 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00334 K20309 - gmx:100779691 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00334 1 4937320 4939402 Pumo1g00334 1 4937320 4939402 ECH