LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo1g00321	ATGTCAACAGGTCAGCAGCAATACATGTCAAGTGTTGTATCTGTGTTATTATGGCATGCCATTGCTGTGCTTTTGGTTTCAAATTTGGGGTGTGCTGCAAGCCTTGATGGCAGAAAGGGACAAACAAAACACAGAGGTCAGGTGATCTATGCCCACAATGGAGCTGTTGCCACTGATGACCGTAGATGCTCAAGGATTGGGAAGGATGTTCTCCGAGAAGGAGGGCATGCAGTGGATGCAGCAGTGGCTGCTGCCCTCTGTTTGGGAGTTGTAAGCCCTGCTTCAAGTGGCCTTGGTGGTGGAGCCTTTATGCTTCTCAGGTTGAATAATGGGCTCGCAAAGGCCTTTGATATGAGAGAAACTGCTCCTGCTCTTGCTTCCAAGGATATGTATGCTGGAAATACTACTTTGAAGGCCAAAGGTGGCCTATCTATAGCAGTTCCTGGAGAACTTGCTGGCCTTCATGAGGCGTGGAAACAACATGGGAAGCTTCCATGGAAAAGACTTGTAAAGCCAGCTGAGATTCTAGCGCGTAGAGGGTTTAAGATATCACCATACCTCCACATGCAGATGGAAGCAACAAAGTCAGATATATTGGAAGACAAGGGTCTTCGTAGCATATTTGCACCAAATGGAGAGCTCTTGAAGGCAGGTGACATATGCTACAATAAGAAACTAGCTGAGACTCTCGGAACAATATCCAAGTTTGGCCCAAAAGCCTTCTATGATGGATTAATTGGTCATAATTTAGTTAAAGAAGTTCAGAATGCTGGAGGGATATTGAGCATGAAAGACCTCAAAAGTTACACTGTTAAACAGAAGAAACCCATATCTAATGATGTTCTTGGACTAAAGCTCCTTGGCATGCCTCCCCCTTCAGGTGGGCATCCAATGATGCTACTGCTGAACATTCTAGATCAATATAAACTCCCTTCTGGCCTTTCTGGTGCCCTTGGCTTCCATCGAGAAATTGAAGCTTTGAAGCATGTATTTGCCGTGAGAATGAATCTTGGTGACCCTGATTTTGTAAATATAACTGGGGTTCTTTCTGATATGCTTTCTCGTAGGTTTGCTAAAGAGTTGAAAAATGACATCAATGATAATAAGACTTTTGGCCCCAGTCATTACGGTGGCAGGTGGAATCAGATCCATGATCATGGTACAAGTCATTTAAGTATCATAGATCTTGAGCGAAATGCCATTTCCATGACTACCACTGTAAATGCTTATTTTGGTTCAAAGATCCTTTCACCAAGTACAGGAATAGTACTGAACAATGAAATGGATGATTTTTCCATACCTAGAAATGTTACCAAGGATGTTCCACCACCAGCTCCTGCCAATTTCATCATGCCAGGAAAGCGGCCACTATCATCCATGTCACCCACTATTGCCCTTAAGGATGGGAAGCTAAAAGCTGTAGTAGGTGCAAGTGGAGGTGCTTACATCATTGGTGGAACTTCAGAGGTTCTTTTGAATCACTTCGTTAAAGGACTGGATCCTTTTTCTTCTGTAACGGCTCCAAGGGTCTATCATCAGCTAATACCTAACGTGGTTAATTATGAGAATTGGACAACTGTGTACGGTGATCACTTTGAACTTCCTGCTGATATCAGGGAAGCCCTTAAAAGTAAGGGCCATGTCCTAAAGGCCCTTGCCGGTGGGACTATTTGCCAATTTATTGTTTTAGACACTTTTGGCAGAACAAATAAAGGGATTGGAAATGAAAAGCTTGTGGCAGTGAGTGATCCAAGAAAGGGTGGTTTTCCTGCAGGCTTTTGA	1782	0.4366	MSTGQQQYMSSVVSVLLWHAIAVLLVSNLGCAASLDGRKGQTKHRGQVIYAHNGAVATDDRRCSRIGKDVLREGGHAVDAAVAAALCLGVVSPASSGLGGGAFMLLRLNNGLAKAFDMRETAPALASKDMYAGNTTLKAKGGLSIAVPGELAGLHEAWKQHGKLPWKRLVKPAEILARRGFKISPYLHMQMEATKSDILEDKGLRSIFAPNGELLKAGDICYNKKLAETLGTISKFGPKAFYDGLIGHNLVKEVQNAGGILSMKDLKSYTVKQKKPISNDVLGLKLLGMPPPSGGHPMMLLLNILDQYKLPSGLSGALGFHREIEALKHVFAVRMNLGDPDFVNITGVLSDMLSRRFAKELKNDINDNKTFGPSHYGGRWNQIHDHGTSHLSIIDLERNAISMTTTVNAYFGSKILSPSTGIVLNNEMDDFSIPRNVTKDVPPPAPANFIMPGKRPLSSMSPTIALKDGKLKAVVGASGGAYIIGGTSEVLLNHFVKGLDPFSSVTAPRVYHQLIPNVVNYENWTTVYGDHFELPADIREALKSKGHVLKALAGGTICQFIVLDTFGRTNKGIGNEKLVAVSDPRKGGFPAGF	593

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo1g00321	593	NCBIfam	gamma-glutamyltransferase	56	548	IPR000101	GO:0006751\|GO:0036374
	Pumo1g00321	593	PRINTS	Gamma-glutamyltranspeptidase signature	452	467	-	-
	Pumo1g00321	593	PRINTS	Gamma-glutamyltranspeptidase signature	388	406	-	-
	Pumo1g00321	593	PRINTS	Gamma-glutamyltranspeptidase signature	144	162	-	-
	Pumo1g00321	593	PRINTS	Gamma-glutamyltranspeptidase signature	412	430	-	-
	Pumo1g00321	593	PRINTS	Gamma-glutamyltranspeptidase signature	476	493	-	-
	Pumo1g00321	593	PRINTS	Gamma-glutamyltranspeptidase signature	289	308	-	-
	Pumo1g00321	593	PRINTS	Gamma-glutamyltranspeptidase signature	260	276	-	-
	Pumo1g00321	593	PRINTS	Gamma-glutamyltranspeptidase signature	76	101	-	-
	Pumo1g00321	593	PRINTS	Gamma-glutamyltranspeptidase signature	162	181	-	-
	Pumo1g00321	593	PANTHER	GAMMA GLUTAMYL TRANSPEPTIDASE	13	593	IPR000101	GO:0006751\|GO:0036374
	Pumo1g00321	593	Gene3D	-	383	593	IPR043137	-
	Pumo1g00321	593	FunFam	Gamma-glutamyltransferase 5 isoform 1	276	380	-	-
	Pumo1g00321	593	SUPERFAMILY	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	45	593	IPR029055	-
	Pumo1g00321	593	Gene3D	-	276	380	IPR043138	-
	Pumo1g00321	593	FunFam	Glutathione hydrolase 1	383	593	-	-
	Pumo1g00321	593	Pfam	Gamma-glutamyltranspeptidase	69	588	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo1g00321	Pumo-Chr1	4803510	4808191	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo1g00321	43	593	Miscellaneous Gene Families	AT4G39640	67.509	0.0	757

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo1g00321	K18592		-	gmx:100797040	1046.96