Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00319 ATGGCCGAAACTCGAGACGCCGCCGCTGATGGGGTGCCCGGAACGCCCGCCATAAGGGAAGTGAGGCCCGAGACCGGGGCCCATGCGGGAATCGGGTCGGGTGGGATTCGGAGGGTGAATTTCCGAGCGGAGATTGACACGTCGCCGCCATTCGGGTCGGTGAAAGAGGCCGTGACCCGTTTTGGAGGTAGCGGGCCCTGGATACCCTTTTTTAACAACATTGAAGATTTTGACCTAAAGAAAGTGGAGGAACAAGCAGCAGAGTTGGAGAAGGATTTGATTGTCAAGGAACTTGAAACGCTTGACGTGCTCGAAGAACTGGGAGCTACCAAGAGGATTGTGGAGGACTTGAAGCAGCAGTTACAAAAGGAGGCTATGAAATGTTTAGCAACTCGAGATGTAAATTCATATGAACCAGTTGGAACTCCTGTTATTAAGGAGATGGATAAAGAAAGTTGTGGAAATAATGTCAATGATCAAGAACAGATGATGCAAATTCCAAGCCCATGCTCTATGTCATCATCACCTGATATGATCTTAATGGAGTTGAAACAAGCCAAATTGAATCTAGGCAAAACTATAAATGAACTTGGGGTGATACAATCCTCTGTTGAATCTTTGAATAAGAAGATGAAGAAGGAGAAATTTTTTCTGGAGAGGACACGTGAAAAGCTAGCATCAAAGTTTGCAGCAGTATCTGCTCAAGAGAGGGTCCAAGAGCAAACGAGATTTAATCCACCAGCACCTCATGTAGAATGCACCTTTGGTAACCCTGCAAATAATTTCAATTCTGATTCTGGGCAGTGCAATAGAATGGCTGAGACAAGAAGACCTGAACCTTTAAAGCCCTTAACCTTAAGTGTGTATGAAGAATATGGATTTAGTGTTAAGACTGCTGAGATGAGGTGGCTTGCGGCTAAAAAGATGGAAGAAGCTGCAAGGGCAGCAGAAGCTATTGCTCTTGCTGAAATCAAGGCTCTATCTAATGCTGAGAGATCTTCAGGATTTGTTCTGCCAGAACCTGAGAAAGTCACTTTTGCTTTTGGAGAGCACTCTCCCCTAAACCCCAAGGCTCAGATACCCGAGGAGTCAACCTTGAAGAAGGTAATAGATTCTAAGTTTCAAATTGATGAAACAAAAATTTCTAAATTGACTATTTTGAAGAAGTTGGAGGAAGCAACTGAAGAAGTTCTACACAGCAAACAAGTCTTGACAGATGCTTTAAACAGAGTTGAAACTGCAAACAGAAAGCAGCATGCTGCTAAGGAGGCTCTAAGGAGATGGATTCCAGAGGATGATATGAAGGAGTATAACACTATTAATTGCAACAAGTTTAATCAAGCTGGAATTTGTCAAGATTCTCTGCAGGATGTAACCAGGTCAACAACAGCAAACAATGATCCAAAGCCTGCTTTAAGGCCCACAATTTCAATGAGAGATGTACTTAGCAGAAAGCAGGTTCCTGAAGGATATGCTACAAGAAAGGAGATGGAAGAGCACACTGAAAGACAAAAGGTAGCGTTGAGTCAAATGCTTCAAGCATTGAGGGAAGATCTAACTCTTCCACCAAAGACTGAGAAAGATGGGAGCAATCAGAAGCCGTTCATAGCACAGAGGAAGAAATTTGGATTCATTCAAATATCACTTCCCATGGCAAAGCCAAATAAGAAAAGGGCATGA 1680 0.4345 MAETRDAAADGVPGTPAIREVRPETGAHAGIGSGGIRRVNFRAEIDTSPPFGSVKEAVTRFGGSGPWIPFFNNIEDFDLKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEAMKCLATRDVNSYEPVGTPVIKEMDKESCGNNVNDQEQMMQIPSPCSMSSSPDMILMELKQAKLNLGKTINELGVIQSSVESLNKKMKKEKFFLERTREKLASKFAAVSAQERVQEQTRFNPPAPHVECTFGNPANNFNSDSGQCNRMAETRRPEPLKPLTLSVYEEYGFSVKTAEMRWLAAKKMEEAARAAEAIALAEIKALSNAERSSGFVLPEPEKVTFAFGEHSPLNPKAQIPEESTLKKVIDSKFQIDETKISKLTILKKLEEATEEVLHSKQVLTDALNRVETANRKQHAAKEALRRWIPEDDMKEYNTINCNKFNQAGICQDSLQDVTRSTTANNDPKPALRPTISMRDVLSRKQVPEGYATRKEMEEHTERQKVALSQMLQALREDLTLPPKTEKDGSNQKPFIAQRKKFGFIQISLPMAKPNKKRA 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00319 559 Coils Coil 104 124 - -
Pumo1g00319 559 Coils Coil 498 518 - -
Pumo1g00319 559 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 43 130 - -
Pumo1g00319 559 MobiDBLite consensus disorder prediction 1 33 - -
Pumo1g00319 559 Coils Coil 72 99 - -
Pumo1g00319 559 Pfam Weak chloroplast movement under blue light 295 432 IPR008545 -
Pumo1g00319 559 Pfam Weak chloroplast movement under blue light 43 125 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00319 Pumo-Chr1 4776782 4780105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00319 - - gmx:100776514 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00319 1 4776782 4780105 Pumo9g02243 9 55688921 55690990 ECH
Pumo1g00319 1 4776782 4780105 Pumo1g00319 1 4776782 4780105 ECH
Pumo1g00319 1 4776782 4780105 Pumo9g02243 9 55688921 55690990 PCT