Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00312 ATGGCAATTGGCAACTCGATCAAGAAGAGAGCATCAGCATCAGAACAAAGACACAACATGGAGGCAGTTCAATCGTGGGTTTCAAACCACAAGCTCGCCAGCATTGGAGCACTCTGGGCCTCTGGAATTGGAGCATCACTTGTGGCTTATTCATGCAAAAAGTCTCCAATGAAGCCTAGTCTCAGGCTCATCCATGCTAGGATGCATGCTCAGGCTCTAACTTTAGCGGTGTTATCCGGTGCAGCTGCTTATCATTATTATGAGAAACGTGATGTTCAGCTAAAACCAGTGGCAGATAATATTCCTGCTCCCAATGTCACCCAGATGGTTGAATATGAACTTCACAGTCCTTTCTAA 357 0.4566 MAIGNSIKKRASASEQRHNMEAVQSWVSNHKLASIGALWASGIGASLVAYSCKKSPMKPSLRLIHARMHAQALTLAVLSGAAAYHYYEKRDVQLKPVADNIPAPNVTQMVEYELHSPF 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00312 118 ProSiteProfiles HIG1 domain profile. 1 96 IPR007667 -
Pumo1g00312 118 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 19 90 IPR040153 -
Pumo1g00312 118 Gene3D - 32 91 - -
Pumo1g00312 118 Pfam Hypoxia induced protein conserved region 30 80 IPR007667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00312 Pumo-Chr1 4722907 4725158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00312 - - gmx:100500345 179.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00312 1 4722907 4725158 Pumo1g00312 1 4722907 4725158 ECH
Pumo1g00312 1 4722907 4725158 Pumo9g02251 9 55768388 55769494 PCT