Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00306 ATGGTTTCAGTTGATAATGGGATTGGGAATCCCAAAGATGAAATTGAGGAATCTAATGGGAGTAAAGTGATGGAGTTTGCATCTATAGATATTTCAACTACTCAAAAAACACTTCTGAGCAGTGAAGATCCTCAGAGAAAGCTTCAGGGCACCTTAAGTTCTTCTGTTCCTAATAGGATAATTAAATTTGGTTCTGCATCTGCCAAATTCAAAAGGCTTGCTACTGAGAGAGACCAAATTTCACTATCTGTGCCTTCTCCTCGTTCCAAGAGCCTAAGAGCACGTTTCAGTGGCATGTTTGCTCAGAAACTTGACTGGAGTTCAGTCAAGAAAATGTGCATGGAATGGATTAGAAGCCCAGTAAACATGGCCCTTTTTGTGTGGATAATTTGTGTTGCTGTTTCGGGTGCAATTCTGTTCCTTGTCATGACAGGCATGTTGAATGGTGTGCTACCAAGGAAGTCTCAGAGGAATGCATGGTTTGAAATAAACAACCAAATACTCAATGCATTGTTTACACTTATGTGTTTGTACCATCACCCGAAGAGGTTCTACCACCTTGTTCTTCTGATCAGATGGAGACCAAATGACATCTCTAGACTTAGAAAGGTATATTGCAAGAATGGCACTTACAAGCCCCATGAGTGGACACATATGATGGTAGTGGTCATTCTCCTTCATGTTAATTGTTTTGCTCAATATGCACTTTGTGGTCTAAACTTAGGGTATAAAAGGTCTGAGAGACCTGCCATTGGAGTTGGAATATGTATATCTTTTGCAATTGCTGCTCCTGCAATTGCTGGTTTGTACACCATTCTCAGCCCACTTGGGAAGGACTATGACTGTGAGATGGATGAAGAAGCACAGGTTCAAATTACAGCTTCTCAAGGGCAAGAGCAGCTGAGAGAGAAACCATTTGAGAAGAAATATTCATTTGCATCCAAAGATCAACAAAGGGTTGTTGAAAATAGACCAAAGTGGAGTGGAGGAATACTTGACATTTGGAACGATATTTCCTTAGCATATCTCTCACTTTTCTGCACCTTTTGTGTGTTTGGGTGGAATATGGAGAGGCTTGGCTTTGGAAACATGTATGTTCATATTGCCACTTTTATGCTATTTTGTATGGCTCCTTTCTGGATTTTTCTTTTGGCTTCGGTTAACATAGATGATGACAATGTTAGGCAGGGTCTAGCAGCTGTTGGAATCATTCTTTGTTTTCTTGGTTTACTGTATGGTGGATTTTGGAGGATCCAAATGAGAAAGAGGTTCAATTTACCTGCCTATGACTTCTGTTTTGGCAAACATTCAGTTTCTGATTACACACTTTGGCTATGCTGTTGCTGGTGCTCTCTTGCTCAAGAAGCAAGGACCGGGAATAACTATGATCTTGTAGAAGATAAATTCTCTAGCAAAGAAACTGATACTGATGATCAACCATCAATTTCACCTTTGGCTCGTGAAAATGTGGTATCAACCAAATCTGGCACAAGTTCTCCTCTGGGTAGCACTAGCAACTCTTCCCCTTATATGATGAAAACATCTAGTCCTCCAAATTCAAGCAATGTCTTAAAGGGACATTACAGTCCAGATAGGTTGCTATCTACTTTAAACGAAGAGAATTGTGAAAGAGGTAAAGATGGAACAATGAACCCACCGGCTCCTTCATTGATACATAGAGAATGA 1686 0.4027 MVSVDNGIGNPKDEIEESNGSKVMEFASIDISTTQKTLLSSEDPQRKLQGTLSSSVPNRIIKFGSASAKFKRLATERDQISLSVPSPRSKSLRARFSGMFAQKLDWSSVKKMCMEWIRSPVNMALFVWIICVAVSGAILFLVMTGMLNGVLPRKSQRNAWFEINNQILNALFTLMCLYHHPKRFYHLVLLIRWRPNDISRLRKVYCKNGTYKPHEWTHMMVVVILLHVNCFAQYALCGLNLGYKRSERPAIGVGICISFAIAAPAIAGLYTILSPLGKDYDCEMDEEAQVQITASQGQEQLREKPFEKKYSFASKDQQRVVENRPKWSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFLLASVNIDDDNVRQGLAAVGIILCFLGLLYGGFWRIQMRKRFNLPAYDFCFGKHSVSDYTLWLCCCWCSLAQEARTGNNYDLVEDKFSSKETDTDDQPSISPLARENVVSTKSGTSSPLGSTSNSSPYMMKTSSPPNSSNVLKGHYSPDRLLSTLNEENCERGKDGTMNPPAPSLIHRE 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00306 561 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 561 - -
Pumo1g00306 561 NCBIfam uncharacterized Cys-rich domain 326 458 IPR006461 -
Pumo1g00306 561 MobiDBLite consensus disorder prediction 471 561 - -
Pumo1g00306 561 MobiDBLite consensus disorder prediction 476 526 - -
Pumo1g00306 561 Pfam Protein of unknown function (DUF2985) 115 193 IPR021369 -
Pumo1g00306 561 Pfam PLAC8 family 327 457 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00306 Pumo-Chr1 4680255 4682956 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00306 - - gmx:100811964 1042.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00306 1 4680255 4682956 Pumo9g02259 9 55833057 55833893 ECH
Pumo1g00306 1 4680255 4682956 Pumo1g00306 1 4680255 4682956 ECH
Pumo1g00306 1 4680255 4682956 Pumo9g02259 9 55833057 55833893 PCT