Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00301 ATGTCAACCTCATCCTCTTCCCAAAGCCTCAAAATTGGCATAGTTGGATTCGGTAACTTTGGCCAGTTTCTCGCCAAGACAATGCTAAAACAAGGCCACACTCTCACAGCAACTTCTCGATCTGATTACTCTGAACTCTCTCTCCAAATGGGCATCCAATTTTTCAGGGATGTCAGCGCATTCCTTGCCGCGGACATAGATGTTATCGTGTTGTGCACATCGATATTATCGCTATCCGAGGTTGTAGGGTCAATGCCGCTCACTTCCCTGAAGCGTCCAACGCTCTTTGTTGATGTTCTTTCTGTCAAAGAGCACCCAAGAGAGCTTCTACTACGAGTGTTGCCAGAGGACTCAGACATACTCTGCACGCACCCAATGTTTGGTCCTCAGACTGCGAAGAATGGATGGAGAGATCTCACTTTCATGTACGACAAAGTTCGGATAAGAGACGAAGCTACCTGCTCTAATTTCATCCAAATTTTTGCTAGTGAGGGTTGCAAGATGGTACAGATGTCCTGTGAGGAACATGACAGAGCAGCTGCTAAGAGCCAATTTATCACACACACAATTGGCAGGACATTGGGAGAAATGGATATTAAATCCACACCCATTGACACTAAGGGCTTTGAGGCACTTGTTAAATTGAAGGAGACGATGATGCGAAATAGTTTTGATTTGTACAGTGGATTATTCGTGTATAACAGATTCGCCACACAAGAGCTGGAAAACCTTGAACATGCCTTGTACAAAGTCAAAGAAACGCTGGTTCAAAGGACGAATGAGGAGCAGGGTAAAGAAAGAACTGAAAGTTGA 813 0.4465 MSTSSSSQSLKIGIVGFGNFGQFLAKTMLKQGHTLTATSRSDYSELSLQMGIQFFRDVSAFLAADIDVIVLCTSILSLSEVVGSMPLTSLKRPTLFVDVLSVKEHPRELLLRVLPEDSDILCTHPMFGPQTAKNGWRDLTFMYDKVRIRDEATCSNFIQIFASEGCKMVQMSCEEHDRAAAKSQFITHTIGRTLGEMDIKSTPIDTKGFEALVKLKETMMRNSFDLYSGLFVYNRFATQELENLEHALYKVKETLVQRTNEEQGKERTES 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00301 270 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 172 258 IPR008927 -
Pumo1g00301 270 Gene3D - 1 177 - -
Pumo1g00301 270 PANTHER AROGENATE DEHYDROGENASE-RELATED 4 267 IPR045011 GO:0006571|GO:0033730
Pumo1g00301 270 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 171 IPR036291 -
Pumo1g00301 270 Coils Coil 234 254 - -
Pumo1g00301 270 Pfam Prephenate dehydrogenase, nucleotide-binding domain 25 130 IPR046826 GO:0070403
Pumo1g00301 270 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 10 270 IPR003099 GO:0004665|GO:0006571|GO:0008977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00301 Pumo-Chr1 4639142 4641248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00301 K15227 - gmx:100787362 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00301 1 4639142 4641248 Pumo1g00301 1 4639142 4641248 ECH