Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00300 ATGAAGCCACACACTCAGGCTTCTTCTTTAGCCACCCAACTCCCACACGTGACTTACTTTCGCGGCGCCACTGCCGCACGTGCCGCGCCATCGGAGCCTCCTCATGACTCCGCCGGAGGCCTCGAATTCCGCAGCGTCTGGACCGCGAAACGCCGCCGCATCAACCTGTCCGTCCGGCACGTGAGTCGCGTCACCGCGGCGTCGAATCCCGGCGGTTCCGACGGCGACGAGAATCGAGCTCGGAGCAGCCGGCGCGGCGTGCTGATGGCGCCGTTCCTAGTCGCCGGCGCGTCGATTCTGCTCTCGGCGGCGACTTCGAGGGCGGAGGAGAAGGCGCTGGAATCTCCTCCGGCGGCGCCGAAGCTGGAGGAGCAGGCGAAGAAGAAGGAAGAGGAGGAGGTGATAACGTCGAGGATTTACGACGCGACGGTGATAGGAGAACCGTTGGCGATAGGGAAAGAAAAAGGGAAAGTGTGGGAGAAGCTGATGAATGCTCGAGTGGTGTATTTAGGTGAAGCAGAGCAGGTTCCGGTTCGAGATGATAGGGAATTGGAGCTTGAGATCGTGAAGAATTTGCATAGGCGCTGTTTGGAGAAGGAAAAACGATTGTCTCTGGCGCTTGAAGTTTTCCCCTCTAATCTTCAGGAACCGCTCAATCAGTATATGGATAAGAAGATAGATGGAGACACCTTGAAGTCTTATACGTTGCATTGGCCGCCTCAAAGATGGCAGGAGTATGAACCTATTCTGAGTTTCTGTCGTGAAAATGGAATTCATCTTGTTGCTTGTGGTACTCCACTGAAGATCATAAGAACTGTCCAAGCAGAAGGAATTCGTGGGCTTACAAAGGATGAACGTAAACTATATGCACCTCCAGCTGGTTCAGGCTTCGTATCAGGCTTTACTTCTATCTCACGCAGATCTTCAGTTGATAGTACTCAAAATCTGTCTATTCCTTTTGGTCCAAGCTCATACCTTTCTGCACAGGCTAAAGTAGTTGATGAGTATTCTATGTCCCAGATTATCTTACAAAATGTGCTTGATGGAGGGGCCACTGGTATGTTAATAGTTGTGACTGGTGCAAGCCATGTTGCATATGGATCTAGAGGAACTGGAGTGCCAGCAAGAATTTCAGGAAAAATACAAAAGAAAAACCAAGCAGTTATATTACTTGACCCTGAAAGACAATTCATTCGCAGAGAAGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAGTAGAAATTGCTTTGACCGTGCTGAGATTGCTCGGGTTATGAATGCTGCTGGGCGGAGGCGAGATGCCCTCCCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCACCAGAGGTATTGCAGAACTTCTTTGATCTAGAGCAGCATCCTCTGATTTCAGAACTCACTCACCGGTTCCAGGGATTCAGGGAAAGATTGTTGGCAGATCCCAAATTCTTGCACAGATTAGCCATAGAAGAAGCTATATCAATAACAACTACATTATTGGCACAGTACGAAAAGCGGAAAGAAAATTTTTTCCAAGAGCTTGACTACGTTATTACGGACACTGTCAGAGGATCAGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCACCAACTTTGTCATTCCTTTCATATGCTGATGAGATGAAAACACCCGACAACATTGGTTCTCTAATGGGACTTCTTGGCTCAATCCCGGACAATGCATTTCAAAAGAATCCAGCAGGGACAAACTGGAATCTCAATCATAGAGTTGCATCAGTTGTATTTGGTGGGCTAAAACTTGCAAGTGTTGGATTTATTTCAAGCATAGGAGCTGTGGCTTCATCAAATTCTCTATATGCAATTCGTAAAGTCCTTAATCCAGCAGTTCTCACTGAACAACGGATTATAAGGTCACCAATACTCAAAACTGCAGTTATATATGCATGCTTTCTTGGAATATCTGCAAATCTCCGTTATCAGATAATTGCTGGGATAGTGGAGCATCGGATTTCTGAACAGTTTGCTTCTCAAACATTCTTTGTAAATATGCTTTCTTTTGTAGCACGGACAGTCAATTCGTATTGGGGAACCCAGCAATGGATTGACCTAGCGCGCTTTACTGGCCTACAAGTTAGAAAGACAGAGTCACCAACATCAGATTCTCCGAATCCTGCTGCAATTTTATGCAACGAAACAGAAGAAGCCAGCATTGATGAGATAGAAAAATAA 2238 0.4674 MKPHTQASSLATQLPHVTYFRGATAARAAPSEPPHDSAGGLEFRSVWTAKRRRINLSVRHVSRVTAASNPGGSDGDENRARSSRRGVLMAPFLVAGASILLSAATSRAEEKALESPPAAPKLEEQAKKKEEEEVITSRIYDATVIGEPLAIGKEKGKVWEKLMNARVVYLGEAEQVPVRDDRELELEIVKNLHRRCLEKEKRLSLALEVFPSNLQEPLNQYMDKKIDGDTLKSYTLHWPPQRWQEYEPILSFCRENGIHLVACGTPLKIIRTVQAEGIRGLTKDERKLYAPPAGSGFVSGFTSISRRSSVDSTQNLSIPFGPSSYLSAQAKVVDEYSMSQIILQNVLDGGATGMLIVVTGASHVAYGSRGTGVPARISGKIQKKNQAVILLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQHPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITTTLLAQYEKRKENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADEMKTPDNIGSLMGLLGSIPDNAFQKNPAGTNWNLNHRVASVVFGGLKLASVGFISSIGAVASSNSLYAIRKVLNPAVLTEQRIIRSPILKTAVIYACFLGISANLRYQIIAGIVEHRISEQFASQTFFVNMLSFVARTVNSYWGTQQWIDLARFTGLQVRKTESPTSDSPNPAAILCNETEEASIDEIEK 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00300 745 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 53 743 - -
Pumo1g00300 745 SUPERFAMILY EreA/ChaN-like 157 413 - -
Pumo1g00300 745 MobiDBLite consensus disorder prediction 114 130 - -
Pumo1g00300 745 Pfam Haem-binding uptake, Tiki superfamily, ChaN 158 377 IPR007314 -
Pumo1g00300 745 Pfam Protein RETICULATA-related 484 668 IPR021825 -
Pumo1g00300 745 MobiDBLite consensus disorder prediction 110 130 - -
Pumo1g00300 745 Gene3D - 131 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00300 Pumo-Chr1 4631412 4641248 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00300 - - gmx:100790538 1363.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00300 1 4631412 4641248 Pumo1g00300 1 4631412 4641248 ECH