Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00299 ATGGAATCCTCTGCTGCCATTCGATCCTTTCACTATCCCATAGGTACTATGTCCCATATGCGAGCCTCCCTTGAGAAGCAAGTTGTAGTTCCCATCCATAATGTCAGATGGAACTCTAAAAGTAGGCTTTTGATCCAGCATTTGGCATATGGTCAGAAGCACATTAATTCCCACGTGAAGGGGAAGAACACACTAGTTTCATGTGCAAAAACAGCTGAAGCTATCAACACATCCAAGTCTGATGCTTCTTCAGATAACACTCCACAAGGCTCACTGGAGAAAAAGCCTTTGCAAACTGCTACTTTTCCTAATGGATTTGAGGCTTTGGTATTAGAGGTCTGTGACGAGACTGAAATTGCTGAACTGAAAGTGAAGGTTGGAGATTTTGAAATGCATATTAAGCGAAACGTTGGAGCAACAAAGGTTCCTCTGTCTAACATTTCACCAACTACACCACCACCTATTCCAAGTAAACCTATGGATGAATCAGCAACCAGTACCCTGCCACCATCACCACCAAAATCATCTCCAGAAAAGACCAACCCATTTGCAAATGTTTCCAAAGAGAAATCACCAAGATTGGCAGCATTGGAGGCTTCTGGTACCAATACCTATGTCTTAGTATCATCTCCCACGGTTGGCTTATTCCGAAGAGGTAGAACAGTGAAAGGGAAGAAGCAACCTCCCATCTGTAAAGAGGGTGATGTAATCAAAGAAGGGCAAGTCATAGGGTATTTGGATCAGTTTGGCACTGGACTTCCTATTAAGTCTGATGTGGCTGGAGAAGTGTTGAAGCTACTTGTTGAGGATGGAGAGCCTGTTGGTTATGGAGACCCTCTTATTGCTGTCTTGCCGTCTTTTCATGACATCAAATTGTAG 879 0.4346 MESSAAIRSFHYPIGTMSHMRASLEKQVVVPIHNVRWNSKSRLLIQHLAYGQKHINSHVKGKNTLVSCAKTAEAINTSKSDASSDNTPQGSLEKKPLQTATFPNGFEALVLEVCDETEIAELKVKVGDFEMHIKRNVGATKVPLSNISPTTPPPIPSKPMDESATSTLPPSPPKSSPEKTNPFANVSKEKSPRLAALEASGTNTYVLVSSPTVGLFRRGRTVKGKKQPPICKEGDVIKEGQVIGYLDQFGTGLPIKSDVAGEVLKLLVEDGEPVGYGDPLIAVLPSFHDIKL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00299 292 MobiDBLite consensus disorder prediction 142 188 - -
Pumo1g00299 292 Pfam Biotin-requiring enzyme 224 281 IPR000089 -
Pumo1g00299 292 MobiDBLite consensus disorder prediction 77 96 - -
Pumo1g00299 292 CDD biotinyl_domain 208 283 - -
Pumo1g00299 292 Gene3D - 204 283 - -
Pumo1g00299 292 SUPERFAMILY Single hybrid motif 201 282 IPR011053 -
Pumo1g00299 292 PANTHER IS A MEMBER OF THE PF|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATED 33 291 - -
Pumo1g00299 292 FunFam Biotin/lipoyl attachment domain-containing protein 204 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00299 Pumo-Chr1 4601788 4608809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00299 110 285 Acyl Lipid Metabolism Gene Families AT5G15530 25.424 3.83e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00299 - - gmx:100792471 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00299 1 4601788 4608809 Pumo1g00299 1 4601788 4608809 ECH