Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00292 ATGCCTTCTTCTCTTCAGTTGGATAGGTTCAATCCTATCACCGTCGCCATCGCCATCGCCAACGGCGTTAACTGCCCCAAGCAGCCTCAAGCCCCGCCGTCCACGGGGGCGCGTCGACTCGTGGTGCCCTCTCTCTCTTCCGGCACGGTGGCGCTCCACCACGCTCACGTGGTGGGGCCCAACCAGTGCTGCTCCGTGGTGACCCAGGCCATCAACGCCCCCGTCGCCGCCGTGTGGGCGGTGGTGCGGCAGTTCGACCACCCGCAGGGGTACAAGAACTTCGTGAAGAGCTGCCACGTCATCACCGGCGAGGGCATTCGCGTCGGCGCCGTCCGCGAGGTCCGGGTAGTGTCGGGGCTCCCCGCCGAGACGAGCACGGAGCGGCTGGAGATCCTGGACGACGAGCGCCACGTCATCAGTTTCAGCGTGGTCGGCGGCGACCACCGCCTCAGGAACTACCGGTCGGTGACGACGCTCCACGCCAACGGGAACGGGACACTTGTCATCGAATCATACGTCGTTGACATACCGCAGGGTAACACTAAGGAGGAAACATGCGTCTTCGTCGACACAATCGTACGTTGTAATTTGCAGTCGCTGGCTCAGATCGCTGAGAATACAACCAAAAACTGTGAAAGTGAAAACACTTGTTAA 654 0.6147 MPSSLQLDRFNPITVAIAIANGVNCPKQPQAPPSTGARRLVVPSLSSGTVALHHAHVVGPNQCCSVVTQAINAPVAAVWAVVRQFDHPQGYKNFVKSCHVITGEGIRVGAVREVRVVSGLPAETSTERLEILDDERHVISFSVVGGDHRLRNYRSVTTLHANGNGTLVIESYVVDIPQGNTKEETCVFVDTIVRCNLQSLAQIAENTTKNCESENTC 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00292 217 Gene3D - 42 217 IPR023393 -
Pumo1g00292 217 CDD PYR_PYL_RCAR_like 83 205 - -
Pumo1g00292 217 FunFam Abscisic acid receptor PYL4 24 217 - -
Pumo1g00292 217 SUPERFAMILY Bet v1-like 62 204 - -
Pumo1g00292 217 Pfam Polyketide cyclase / dehydrase and lipid transport 63 205 IPR019587 -
Pumo1g00292 217 PANTHER - 62 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00292 Pumo-Chr1 4516749 4517999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00292 K14496 - gmx:121174020 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00292 1 4516749 4517999 Pumo9g02281 9 55971055 55975258 ECH
Pumo1g00292 1 4516749 4517999 Pumo1g00292 1 4516749 4517999 ECH
Pumo1g00292 1 4516749 4517999 Pumo9g02281 9 55971055 55975258 PCT