Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00283 ATGGCAATTTCTGTTGAAAGCTTATTGAAAGAGAGAAAGTATCCTTTCATCTTCACCTTCTTGGTCTTGGTCATTTGCGTCACCATCCTCACATTCACCAACACCAACACCAACACCAACACCACCACCACCTCCACTTTCGATCCAATTGGCTTCTACCCCGATGTCAAACCGCAACCACTCGCACATTTTTCTTCCACGACTCCCAAACGCCAAAGATTGCCACTCAAGGGAGAGCCTTTCTTGGTTGATGCAAACATTGATTGGAAGCTTTGTAAGGGTCCATTAGCGGTGGATTATATACCCTGTTTGGATAACTTTAAGGCCATTAAGGCTCTCAAGACAAGGAGGCACATGGAGCACAGGGAAAGGCACTGTCCTCATTCTAGTCCTCACTGTTTGGTGCCCCTCCCCAAAGGGTACAAAGTCCCCCTTCCTTGGCCTACGAGCAGGGACATGATTTGGTACGATAATGTCCCTCATACAAAACTCGTTGAATACAAGAAGGAGCAAAACTGGGTGGTGAAGTCTGACGATTATCTTGTCTTTCCCGGAGGTGGTACTCAATTCAAAGAAGGAGTTCACCATTATACTAAATTCATAGAGAAGACACTACCAGCAATCCAATGGGGAAAGAATATCAGGGTTGTTCTTGATGCTGGTTGTGGAGTTGCTAGCTTTGGCGGCTATCTTCTGGACAAAAATGTTATTACTATGTCATTTGCACCAAAGGATGAGCACGAAGCTCAGATACAGTTTGCTTTGGAACGAGGAATTCCTGCAACTCTTTCTGTCATTGGAACCCAAAAGTTGACATTTGCTGACAATGGATTTGATTTGATCCATTGTGCAAGATGCAGGGTGCATTGGGATGCAGATGGTGGGAAACCGTTGTTTGAACTCAATAGGATTCTTAGACCTGGTGGTTTCTTTGCATGGTCCGCGACACCGGTTTATCGCGATGATGAAAGAGATCGGAAAGTATGGAATGCCATGGTGACCGTAACGAAAGCAATGTGCTGGACTGTTGTGGCTAAGACTCTTGATTCATCTGGAATTGGGCTTGTTATATACCAGAAGCCTACCTCATCTTCCTGTTATCAGGAACGCAAAGAGCGCATCTCCTCCTTTATGTATGCCAAACTCAGTAGCTGCCTTATACCTCTTCCAGTTGATGGTGAGGGTAACCTGCAGAGCTGGCCAATGCCTTGGCCCCAGAGGCTTACCAGTATACCTCCAAGCTTATCGAGTGAATCAGATGCCAGCGAGATGTTCTTGAAGGACACCAAACACTGGTCAGAATTGGTTTCAGACGTTTATAGGGATGGTCTTCCTATAAACTGGTCAAGTGTTCGAAATATAATGGACATGAATGCCGGTTATGCAGGATTTGCTACAGCACTCATTGATCTACCAGTTTGGGTTATGAATGTAGTACCCATTGACATGCCAGATACTCTTACTACTATATTTGACAGAGGGCTAATAGGAATGTACCATGATTGGTGCGAGTCCTTAAATACATACCCTCGCACTTATGATCTTGTTCATGCTAGCTTTCTCTTCAAACATCTTATGCAAAGATGTGACATTGTAGATGTGGTTGTGGAGATAGATCGCATAATGAGACCAGATGGGTATCTCCTGGTTCAGGACTCTATGGAAATCTTTAACAAGCTCGGTCCGGTACTGCGTTCACTTCATTGGTCTGTAACGTTATATCAAAATCAGTTTCTTATTGGTAGGAAGAGTTTCTGGCGTCCAAGGCCGTAG 1773 0.4461 MAISVESLLKERKYPFIFTFLVLVICVTILTFTNTNTNTNTTTTSTFDPIGFYPDVKPQPLAHFSSTTPKRQRLPLKGEPFLVDANIDWKLCKGPLAVDYIPCLDNFKAIKALKTRRHMEHRERHCPHSSPHCLVPLPKGYKVPLPWPTSRDMIWYDNVPHTKLVEYKKEQNWVVKSDDYLVFPGGGTQFKEGVHHYTKFIEKTLPAIQWGKNIRVVLDAGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFADNGFDLIHCARCRVHWDADGGKPLFELNRILRPGGFFAWSATPVYRDDERDRKVWNAMVTVTKAMCWTVVAKTLDSSGIGLVIYQKPTSSSCYQERKERISSFMYAKLSSCLIPLPVDGEGNLQSWPMPWPQRLTSIPPSLSSESDASEMFLKDTKHWSELVSDVYRDGLPINWSSVRNIMDMNAGYAGFATALIDLPVWVMNVVPIDMPDTLTTIFDRGLIGMYHDWCESLNTYPRTYDLVHASFLFKHLMQRCDIVDVVVEIDRIMRPDGYLLVQDSMEIFNKLGPVLRSLHWSVTLYQNQFLIGRKSFWRPRP 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00283 590 CDD AdoMet_MTases 217 311 - -
Pumo1g00283 590 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 332 IPR029063 -
Pumo1g00283 590 Gene3D Vaccinia Virus protein VP39 188 382 IPR029063 -
Pumo1g00283 590 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 25 587 IPR004159 GO:0008168
Pumo1g00283 590 FunFam probable methyltransferase PMT23 189 372 - -
Pumo1g00283 590 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 99 576 IPR004159 GO:0008168
Pumo1g00283 590 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 446 565 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00283 Pumo-Chr1 4429572 4433689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00283 - - gmx:100808221 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00283 1 4429572 4433689 Pumo1g00283 1 4429572 4433689 ECH
Pumo1g00283 1 4429572 4433689 Pumo9g02290 9 56052971 56057101 PCT