Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00276 ATGCTTCACTCCACTTCTCTCCTTCCTCATAATAACCGCTTCGTCTTCTCCTTCCGCTCCAAACCTTCTTATTTCCATTCCCACTCCCTCTCTTTCTCCAAGTTTCTCTCTCTTCCGTCTTCTTCACAATCGTCATGTTGCCACGTGGCTCGAATCTCCACCGAGACCTTGGAAGTCTCGCCGCCGCCGCCGCCCGGCTTCAACTTCCGCCGCGAAATCGCCCGCCTCTCCGACCTCCGCGACAGGCTCGCCGCGTGCACTACTTTAAACGAGAAGCTCCGAGTAATCGACGCCGATTCCAGAGTAAAGCGCTTCTTCGGTTCCCGCCGCGGCCTCGCTAGGGTTTTGGCATCGCTGCAATTGAACTCCGACCAATTGTTCTTGCTCAAGTGCGTGGTTGCCGCGGGGCAGGAGCACGTGCTGTGTTTGGACGAAACGGAATCGCTGGAATCTGCAGCCGCCACGAGTGCCGTGAAGAGCGCGCTTTACGCTCTCGCGGAGATGATTGAGAATATGGATTCCTTTAACGGCAATGGCGGTGCGGGTTTGGGGATGGCGTTGGAGGATCACGAGATTTCGGAGTTATACAAGTCTTTGGCGGAAATTGAGCGATTCTATGACTGTATTGGAGGGATTATTGGATATCAGGTAACAGTACTGGAACTTCTTGTACAAAAATCGTTTGAGATGCAGAATATAAGCTGGGCCCACCACGGGCATGACATGAAAGAATGCCAAATTTTGGGAATTAATGCACCTAATGGGCTTAACCTTTCTGAAGACACAGAGTATGCATCTCAAGCAGCTCTATGGGGCATAGAGGGTTTGCCAGACCTAGGTGAAATTTATCCTTTGGGAGGTTCTGCCGACAGGCTTGGTTTGGTTGATCCTAACACAGGCGAATGCCTGCCTGCTGCAATGCTACCATATTGTGGAAGGACTTTGTTGGAAGGTCTTATAAGAGATCTTCAGGCCAGAGAATTCTTGTACTTCAAGTTATATGGGAAACAATGCATCACACCTGTTGCAATAATGACAAGTTCTGCAAAGAACAACCACAAACATGTCACTTCTCTTTGTGAAAGACTTTCATGGTTTGGAAGAGGTCGATCAACTTTCCAACTTTTTGAGCAGCCTCTTGTTCCAGTTGTTGGTGCAGAAGAAGGCCAGTGGCTGGTCACCAAACCATTCAGTCCCTTGAGCAAGCCTGGTGGTCATGGTGTCATATGGAAACTTGCTCATGACAAAGGCATCTTCAAATGGTTTTATTGTCATGGAAGAAAAGGTGCAACTGTGCGCCAAGTCAGTAACGTGGTGGCAGCTACAGATTTAACCCTCCTAGCCTTAGCAGGGATTGGTTTACGTCAAGGAAAGAAACTGGGATTTGCATCTTGTAAGCGGATCTCGGGTGCCACAGAAGGAGTTAATGTGCTGATGGAGAAGAAAAGTCTTGATGGGAACTGGGAATATGGTGTGTCTTGTATTGAATACACTGAGTTTGACAAGTTTGGAATTACTACTGGACCTCTTGCTCCAAAAGGTTTGCAGGCAGAGTTCCCGGCCAATACAAACATCTTATATATTGATTTGCCTTCTGCGGAGCTAGTTGGATCAAGTAAGAGTGAAACTAGTTTACCTGGAATGGTGCTAAATACTAGAAAGACAATAGTTTACACAGATCAGTATGGAAGACGTCATAGTGTCTCTGGTGGTAGACTTGAGTGCACAATGCAAAATATAGCTGACAATTATTCCAACTCATATTCATCTAGATGTTATAATGATGTGGAAGATAAGCTAGATACTTTTATTGTATATAATGAAAGAAGAAGGGTTACTTCCTCTGCTAAGAAAAAAAGAAGACATGGTGACAAGTCTTTACACCAGACACCTGATGGGGCTCTGTTGGATATCTTACGAAATGCTCATGATCTTCTTTCACAATGTGATATAAGACTTCCTCAGATTGAAGCCAATGAGAACTATGTTGATTCGGGACCACCATTTCTCATCATTTTGCATCCGGCTCTTGGTCCTCTTTGGGAAGTCACTAAGCAAAAATTTTATGGTGGTTCCATATCAGAGGGCTCTGAGTTACAAATAGAGGTTGCAGAGTTTTTTTGGAGGAATGTTCAGCTCAATGGAAGCCTGATCATAATAGCTGAGAATGTTATGGGCTCAATGAAGATTAATGAGAGCGGTGAATCCATACTACATTATGGCCAAAGGTGTGGAAGATGTAAATTGCAAAATGTCAAGGTATTGAACAAGGGAATTGATTGGACTTGTGGTGAAAACATATACTGGAAACATGATGTGCAGCGATCTGAGGTGCTGCAGATCATACTGCATGGAAATGCTGAATTTGAGGCTACTGATGTTGTCTTACAGGGAAATCATGTGTTCGAAGTTCCAGATGGCTACAAACTGAAAATCACGCCAGGAAGCCCAGGTCTCTTCAACTTTAGAAATATCTTTGGCTTGGTTGCTTATGCTTTAGTTGCTTTTCCTAAATTAATATGTGCTGTTATCATGAATGATTATTTTGAGAAAGTTACTGTTGTAATCCTTAGTCAAATTGTATTTGTTCTGTTTAGTCATAGAATGTTACTGATTTAA 2619 0.4429 MLHSTSLLPHNNRFVFSFRSKPSYFHSHSLSFSKFLSLPSSSQSSCCHVARISTETLEVSPPPPPGFNFRREIARLSDLRDRLAACTTLNEKLRVIDADSRVKRFFGSRRGLARVLASLQLNSDQLFLLKCVVAAGQEHVLCLDETESLESAAATSAVKSALYALAEMIENMDSFNGNGGAGLGMALEDHEISELYKSLAEIERFYDCIGGIIGYQVTVLELLVQKSFEMQNISWAHHGHDMKECQILGINAPNGLNLSEDTEYASQAALWGIEGLPDLGEIYPLGGSADRLGLVDPNTGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHKHVTSLCERLSWFGRGRSTFQLFEQPLVPVVGAEEGQWLVTKPFSPLSKPGGHGVIWKLAHDKGIFKWFYCHGRKGATVRQVSNVVAATDLTLLALAGIGLRQGKKLGFASCKRISGATEGVNVLMEKKSLDGNWEYGVSCIEYTEFDKFGITTGPLAPKGLQAEFPANTNILYIDLPSAELVGSSKSETSLPGMVLNTRKTIVYTDQYGRRHSVSGGRLECTMQNIADNYSNSYSSRCYNDVEDKLDTFIVYNERRRVTSSAKKKRRHGDKSLHQTPDGALLDILRNAHDLLSQCDIRLPQIEANENYVDSGPPFLIILHPALGPLWEVTKQKFYGGSISEGSELQIEVAEFFWRNVQLNGSLIIIAENVMGSMKINESGESILHYGQRCGRCKLQNVKVLNKGIDWTCGENIYWKHDVQRSEVLQIILHGNAEFEATDVVLQGNHVFEVPDGYKLKITPGSPGLFNFRNIFGLVAYALVAFPKLICAVIMNDYFEKVTVVILSQIVFVLFSHRMLLI 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00276 872 FunFam UTP--glucose-1-phosphate uridylyltransferase 3 chloroplastic 183 641 - -
Pumo1g00276 872 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 61 781 IPR039741 -
Pumo1g00276 872 SUPERFAMILY Nucleotide-diphospho-sugar transferases 126 724 IPR029044 -
Pumo1g00276 872 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 184 640 IPR029044 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00276 K22920 - gmx:100788781 1509.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00276 1 4350411 4358709 Pumo1g00276 1 4350411 4358709 ECH