Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00250 ATGGGTTTTTCCTCAAAAGAAGAGAAGTCCAAAAGAATATTGAGGGGCTTGAAGACCGTGTTCTTCTTGATCACCATGGTTATATCGCTTCTTCTTTTCTCCGCCCCGGTTCTCCTTGTTATTGCCGATGCACTTGTTCCTTCTGCTTTGCTCTCCACACTTTCCCCTGCTTCTTTCTCCTCGGAAAATCTTGCTTCCCATTTACACAACTACGATTTTCGATACTCTCTCATTGATATTCCCCTTGTATCAATAATACGATCCTTGATCATCTTCTGTGTTTATAGTTTGTGTGATGGACCAAGGCTTTCGCGTGGACCTTATTTGGGGATCACGACGATGTGCTCCGTTTTGTCTCTGATGTTTGTGTCGTTCAAAGCCGTTTACATCTTCAGTGTTTCGGGTGTTGATCGAAGTGGGCATGTTCGTGCCACCGAAATAGCTCTGTTCGTGTGCTCTTGTGCGTTGGCTGTGGGGCATATTATCGTGGCCTACAGAACAAGTTGCAGGGAAAGAAGAAAGCTTTTGGTCTACAAAATTGACATTGAAGCTGTAAGTGTCTCTCCCCCATACACACCACTTGGCACTTTCTTCCCACCAAAGCCAAATTATTTTTTTTAA 621 0.4396 MGFSSKEEKSKRILRGLKTVFFLITMVISLLLFSAPVLLVIADALVPSALLSTLSPASFSSENLASHLHNYDFRYSLIDIPLVSIIRSLIIFCVYSLCDGPRLSRGPYLGITTMCSVLSLMFVSFKAVYIFSVSGVDRSGHVRATEIALFVCSCALAVGHIIVAYRTSCRERRKLLVYKIDIEAVSVSPPYTPLGTFFPPKPNYFF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00250 206 Pfam Cholesterol-capturing domain 61 132 IPR019498 -
Pumo1g00250 206 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00250 Pumo-Chr1 3825656 3828552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00250 8 185 Miscellaneous Gene Families AT1G80280 44.974 1.46e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00250 - - gmx:100811069 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00250 1 3825656 3828552 Pumo1g00250 1 3825656 3828552 ECH
Pumo1g00250 1 3825656 3828552 Pumo9g02324 9 56489198 56493249 PCT