Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00249 ATGAGGATCACTTTGGAGCCGAGCTCGGAGCCCAGCCCAAGCCGCTCTCAAACTCCCAAAGACGAAGTCGAGTGGGTCTCACTTCCCAAGCACCCTCTCTTCACAGCCGGTGGCGCCACCACCACCACCACCGCCGCTTCCCGGAACCTCCTGGCCTGGGACGGAGCCTCGCGCCTCTACTTCTGGGACTCAAACAACCACTGCCTCCACCGCCTCTCTCTCCGACTCGGCGACCCCGATCCCTCTTCCGTCCTCGCCGCTTCCCCCTCTAAGGTGTTGCAAGCTGACGCGGTGCTCGATTTCGATGTTCACAAAATCTCCATCAACAGGAACGGAACAGCGATACTCCTTTTCGGTTCCGAGAGACTCTGTGTCATGTACCTCTATGGACGCGCGTCTAAGAAGGACGTGAACTTGATTTGCAGGACTATTGCTGTTGGTTCTCAGACATATTCCACTGGTGGCAATGATATTCGTGTGTTACAAGCATTATGGCACCCTTACAGTGATACTCATTTGGGAATCCTTTCTTCTGACTCAGTTTTCCGACTTTTCAACCTGGCTGTGGATCCTTTGCAACCAGAGCAAGAATATTATTTACAGCCTGTTGAGCCTGGTAGATCTAGAAATGCCTCATCAGTGTGCCCAGTTGATTTTTCTTTTGGGGGAGACCACTTATGGGACAGGTTTAGTGTTTTTATTTTGTTCAGTAATGGGGCTATCTATGTACTTTGCCCAGTTGTTCCATTTGGAAGTCTCTTCAAATGTGAGTCTTTGGTAGAAATATACAATGATGCTCACACATTTGGAATAATATCAGCTAACTCTGTTGCGGCGAGTAATTCAAACTTGGCCATCTCCTGGTTAGAAGCAGCTTTTCCTGAGTTACAGAACCAAGAAACTGAAGGAGACAGCTTGTCTTTGCTAAGAGCTCATGCGTATGCTTTATTTGATGCATCTCTTGTCTTGCAGGGACCTCTGCGAAGAGTAGGTCAGGATGGGAATGAAGATTCAGTTGGTCGTAGTGCAGAATGTGAAGGTCGTGCAGTTAGTTTTCTCTACAATTTAGTCAGCAAAGACTCTATTTTGGTGACTGCCTGGAGTGGTGGGCAATTACAGATAGATGCTCTAGCCGATGAGATCCAACCTGTCTGGAGTGTTGGTACTCCACCACGTCTTCGTGTTGATTCCCATGACCAAATTCTTGGCCTTGCTATGATTTGTGAGTCAATTGCCAGCAGTAGTTTGTGGAAGCTTGATCATAATGCCTGGTTGGGTAATCCACCCCCTTTGCTGAGATTGGCTATTGTTGATTTGGCTCTGCCACGAAGAGCAGAAAGTGGTTATAATATTTCGTTGTTCATTGATACGCTTATGCCAGAAAGAATATATTCCCTTCATGATGGAGGGATTGACTCAATAGTTTTACATTTTCTTCCATTTACAAGTCAGACAAATGGCAAGGATGATACAATGAAAACACCGTCTGTGCACCCTGTTCTAAATACTTGCCAGAGTGGATTCACCTCAGAACCTTCATTATGTGGCTTTGTGTCATTATCAGATTCATTTGGATATTCATGGATTGTAGCTATTACACTTTCTCTGGAGTGTGTTGTGCTTGAGATGAAAAGTTGGAACCTCTTGCTTCCAGTAAGCATTGATATGGAGAAGAAACCCATTTCATCAGAGGGGGAATCAAAAGAGAGAGATATACCAACAATAATTAGCAAGGAACTACTTAGTGGACCCAAGGAGGTACTTGTTCCTCAGGCCTTTCCAAGTTTACGTTCTGTTGCAGCTGATTCAATTGAAGGCCGATCAACATTACATCAGTATTTCAAGCTGTTTCATGAAACCTATGTGGAGTATGCACATAAGGTGTACCTGGAGCTCAAGCATCACGCACCTCAGTTGAAGAAAATCATTAATGACCAGCATTCTCGATTAGGTGATGCACAACAGAAACTTTTGAAAGTGGAGGAGAAAGAGGCTATATTACAGAAAAGGATAGATCGTGCAATTCAAACGCACAATTCTTTGGAAGAGCGCTTGCAACAATTAAGGAACTTACCTTGTGCTCACAAAAAACCACTGTCCAGAGCAGAGCGACAGTTTAAATCTGAGCTTGACTGCTTTAAAGAAGTTGAGTTGGATGCTTTACATTCTTCTGTTGATGCGCTAAGTGCAAGGCTGAGAAGGCACGTGCAAGCCTCAAAAGCTAATCACCAACAACAGAAAACACCAGGGAAGAAAAGTCATGCAGGAGATGATCAGATATCCATGCTCAAATCATCGCTTGAAAAACTGTCGCTTGTAAATACTGAGAATTCAAAGAAAGTTAAACTTGTGGAGTCTACATTGAGAAACAAAGAAAGAAGCAGCAGAGAATCAAGCCTTCCTATGCCCTAA 2412 0.4469 MRITLEPSSEPSPSRSQTPKDEVEWVSLPKHPLFTAGGATTTTTAASRNLLAWDGASRLYFWDSNNHCLHRLSLRLGDPDPSSVLAASPSKVLQADAVLDFDVHKISINRNGTAILLFGSERLCVMYLYGRASKKDVNLICRTIAVGSQTYSTGGNDIRVLQALWHPYSDTHLGILSSDSVFRLFNLAVDPLQPEQEYYLQPVEPGRSRNASSVCPVDFSFGGDHLWDRFSVFILFSNGAIYVLCPVVPFGSLFKCESLVEIYNDAHTFGIISANSVAASNSNLAISWLEAAFPELQNQETEGDSLSLLRAHAYALFDASLVLQGPLRRVGQDGNEDSVGRSAECEGRAVSFLYNLVSKDSILVTAWSGGQLQIDALADEIQPVWSVGTPPRLRVDSHDQILGLAMICESIASSSLWKLDHNAWLGNPPPLLRLAIVDLALPRRAESGYNISLFIDTLMPERIYSLHDGGIDSIVLHFLPFTSQTNGKDDTMKTPSVHPVLNTCQSGFTSEPSLCGFVSLSDSFGYSWIVAITLSLECVVLEMKSWNLLLPVSIDMEKKPISSEGESKERDIPTIISKELLSGPKEVLVPQAFPSLRSVAADSIEGRSTLHQYFKLFHETYVEYAHKVYLELKHHAPQLKKIINDQHSRLGDAQQKLLKVEEKEAILQKRIDRAIQTHNSLEERLQQLRNLPCAHKKPLSRAERQFKSELDCFKEVELDALHSSVDALSARLRRHVQASKANHQQQKTPGKKSHAGDDQISMLKSSLEKLSLVNTENSKKVKLVESTLRNKERSSRESSLPMP 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00249 803 MobiDBLite consensus disorder prediction 1 21 - -
Pumo1g00249 803 PANTHER NUCLEOPORIN NUP84-RELATED 16 793 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Pumo1g00249 803 MobiDBLite consensus disorder prediction 1 22 - -
Pumo1g00249 803 Coils Coil 650 691 - -
Pumo1g00249 803 MobiDBLite consensus disorder prediction 736 761 - -
Pumo1g00249 803 MobiDBLite consensus disorder prediction 779 803 - -
Pumo1g00249 803 MobiDBLite consensus disorder prediction 782 796 - -
Pumo1g00249 803 Pfam Nuclear pore component 28 222 IPR019321 -
Pumo1g00249 803 Pfam Nuclear pore component 450 785 IPR019321 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00249 K14318 - gmx:100801853 1470.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00249 1 3816936 3822573 Pumo1g00249 1 3816936 3822573 ECH