Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00224 ATGGAAACAGGCATAGCATGCTACACCCGCGGGCCTTTCTTGCCTAGTGTTTCTTCCAAGCACTCTCCACCTTCCATCTCTCCATCTTTTGGCTTGAGGAGTCTGAAATCAAGCTCTTTATTTGGAGAATCGCTAAGAGTGGCATCCAAATCAACACTAAAGGTTTCAAAGACAAAGAATACTTCACTCGTAACCAGATGTGAAATTGGTGACAGTCTGGAAGAATTCCTCACTAAAGCAACACCAGATAAGGGGTTGATCAGGTTGTTGGTGTCCATGGGAGAAGCATTAAGAACAATTTCCTTTAAAGTGAAGACGGCTTCTTGTGGAGGAACACAATGTGTTAATACTTTTGGGGACGAGCAGCTTGCAGTGGATTTGCTGGCTAATCAGCTTCTTTTTGAGGCCTTAAATTACTCCCATTTCTGTAAGTATGCTTGCTCTGAAGAAGATCCTGAGCTCCGGGACATGGGAGGTCCAGTTGAAGGTGGATTTAGTGTTGCATTTGATCCCCTTGATGGCTCCAGCATTGTGGACACAAATTTCACAGTAGGCACCATCTTTGGTGTGTGGCCTGGAGATAAGTTGACTGGGGTCACCGGAAGAGATCAAGTTGCTGCAGCCATGGGGGTTATGGGTCCTAGAACCACATATGTGCTTGCTCTTAAGGACTTCCCTGGCACCCATGAATTTCTTCTGCTTGATGAAGGAAAATGGCAGCATGTCAAAGAGACCACAGAAATTGGTGAAGGAAAACTGTTCTCCCCAGGAAATTTGAGAGCCACATCTGACAATCCCGATTATGCTAAGTTGATCGATTACTATGTCAACGAAAAGTACACATTGAGATACACTGGAGGAATGGTGCCGGATGTCAACCAGATTATTGTAAAAGAAAAAGGAATCTTCACCAACGTGGCATCACCATCAGCCAAAGCCAAGCTGAGACTGTTGTTTGAGGTAGCTCCTTTGGGGTTGTTGATTGAAAATGCTGGAGGTTACAGCAGTGATGGTCATCAGTCTGTGCTAGACAAAGTCATCTCTAACATTGATGAGAGAACTCAAGTTGCTTATGGATCCAAGAATGAGATCATCCGGTTTGAAGAAACCCTGTATGGTAAATCCAGGCTCAAGGGTGGTGTAGCTGTTGGAGCAGCAGCTTAA 1164 0.4485 METGIACYTRGPFLPSVSSKHSPPSISPSFGLRSLKSSSLFGESLRVASKSTLKVSKTKNTSLVTRCEIGDSLEEFLTKATPDKGLIRLLVSMGEALRTISFKVKTASCGGTQCVNTFGDEQLAVDLLANQLLFEALNYSHFCKYACSEEDPELRDMGGPVEGGFSVAFDPLDGSSIVDTNFTVGTIFGVWPGDKLTGVTGRDQVAAAMGVMGPRTTYVLALKDFPGTHEFLLLDEGKWQHVKETTEIGEGKLFSPGNLRATSDNPDYAKLIDYYVNEKYTLRYTGGMVPDVNQIIVKEKGIFTNVASPSAKAKLRLLFEVAPLGLLIENAGGYSSDGHQSVLDKVISNIDERTQVAYGSKNEIIRFEETLYGKSRLKGGVAVGAAA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00224 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 138 158 IPR023079 GO:0005975|GO:0016791
Pumo1g00224 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 198 216 IPR023079 GO:0005975|GO:0016791
Pumo1g00224 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 252 268 IPR023079 GO:0005975|GO:0016791
Pumo1g00224 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 282 302 IPR023079 GO:0005975|GO:0016791
Pumo1g00224 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 344 368 IPR023079 GO:0005975|GO:0016791
Pumo1g00224 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 122 137 IPR023079 GO:0005975|GO:0016791
Pumo1g00224 387 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 250 370 IPR044015 -
Pumo1g00224 387 Gene3D - 68 244 - -
Pumo1g00224 387 CDD FBPase 69 371 IPR000146 GO:0005975|GO:0016791
Pumo1g00224 387 SUPERFAMILY Carbohydrate phosphatase 66 370 - -
Pumo1g00224 387 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 69 371 IPR000146 GO:0005975|GO:0016791
Pumo1g00224 387 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 64 244 IPR033391 -
Pumo1g00224 387 ProSitePatterns Fructose-1-6-bisphosphatase active site. 313 325 IPR020548 GO:0005975|GO:0042578
Pumo1g00224 387 FunFam Sedoheptulose-1,7-bisphosphatase, chloroplastic 245 385 - -
Pumo1g00224 387 FunFam Sedoheptulose-1,7-bisphosphatase, chloroplastic 68 244 - -
Pumo1g00224 387 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 71 373 IPR000146 GO:0005975|GO:0016791
Pumo1g00224 387 Gene3D - 245 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00224 Pumo-Chr1 3482884 3486351 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00224 K01100 - gmx:100786122 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00224 1 3482884 3486351 Pumo1g00224 1 3482884 3486351 ECH