Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00217 ATGGCTCAAATTGCGCTTATTGCTCCAGCAACTGTTATACCTATTACTGGTAGGGGGAAACAACAACAACTACAGCTATCATATGGAAGAAACAAAGTGAGTTTAGCATCAGTGGTTCCGAGTTGGAGGATCGAAAGGGTTCCATGGATTGCTTCATCCAATTCAAATTCACACGGGGATAGAACGAGAAGTGCGGTGGTGAAGGTATCAGAAGGAGGAGCCATCTCTCTCCCTCATGGTTGGCCAGCAGAAAAGGGCTCCGAAGATCAAATCGAAGGCTTGAAAAAAATGAAGGGTTCGAACCGGTTCTTCACGGTGGGGTTGGTGGCGGCGTGGTACTCCTCCAACATTGGGGTGCTTCTCTTGAACAAGTACTTGCTCAGCAACTATGGTTTCAAGTACCCGATCTTCCTCACCATGTGCCACATGACCGCGTGTTCCTTGCTCAGTTACGTTGCCATAGCGTGGATGAAGGTTGTCCCATTGCAAACAATTCGATCCAGGGTGCAGTTCTTCAAGATCTCTGCTCTCAGCCTCGTTTTCTGCGTCTCCGTTGTGTTTGGGAACATTTCTCTACGCTACCTCCCCGTGTCGTTTAACCAGGCCATTGGCGCCACCACGCCCTTCTTCACTGCCGTTTTTGCTTACCTTATGACCTTCAAGAGGGAGGCTTGGCTCACTTATCTCACCCTTGTTCCTGTCGTTACTGGAGTCATCATTGCCAGTGGGGGAGAACCCAGTTTCCATCTGTTTGGATTTATTATATGTGTTGCGGCTACAGGTGCAAGGGCTCTAAAATCAGTGCTACAAGGAATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTCTGCTTTACATGGCTCCAATGGCTGTGGTTTTCCTTCTTCCTGCAACACTTATAATGGAAGACAATGTGGTTGGCATCACGTTGGCTCTTGCCAGAGATGATTCCAAGATCATTTGGTATCTGCTATTTAATTCGGCACTTGCATATTTTGTCAACCTGACCAACTTTTTGGTCACGAAACATACCAGTGCTCTGACCCTTCAGGTACTAGGAAATGCTAAAGGGGCGGTAGCAGTAGTAGTTTCAATTCTAATATTCAGAAACCCAGTTTCGGTCACTGGAATGATGGGTTACTCACTCACAGTCTTTGGAGTTATACTCTACAGTGAAGCCAAAAAGAGAAGCAAGTGA 1209 0.4657 MAQIALIAPATVIPITGRGKQQQLQLSYGRNKVSLASVVPSWRIERVPWIASSNSNSHGDRTRSAVVKVSEGGAISLPHGWPAEKGSEDQIEGLKKMKGSNRFFTVGLVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKVVPLQTIRSRVQFFKISALSLVFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVIIASGGEPSFHLFGFIICVAATGARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEDNVVGITLALARDDSKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYSLTVFGVILYSEAKKRSK 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00217 402 Pfam Triose-phosphate Transporter family 108 395 IPR004853 -
Pumo1g00217 402 Coils Coil 394 402 - -
Pumo1g00217 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 293 396 - -
Pumo1g00217 402 PANTHER SOLUTE CARRIER FAMILY 35 105 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00217 Pumo-Chr1 3418935 3426474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00217 96 402 Organic Solute Cotransporters AT3G11320 91.205 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00217 - - vra:106757848 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00217 1 3418935 3426474 Pumo9g02359 9 56999149 57002529 ECH
Pumo1g00217 1 3418935 3426474 Pumo1g00217 1 3418935 3426474 ECH
Pumo1g00217 1 3418935 3426474 Pumo9g02359 9 56999149 57002529 PCT