Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00206 ATGGACGCTTTATCTAAGAAGAACGAAAATTCTCAAAAGAAAAGAGATGGGGTTTTGTCTTCTCTCACCACAGATTCCAGTGCAGAGTCTAGAGAAACCAGTTTCTGTGGATCCAGCTCCTCAGTTTCTACTGAAGAAGCAAAGGCGAAAGGGTCTTCTTCACCTGCTCCTCTTGGTTGGCCTATTCTCAAGGCCACAATCTCCAAGCGTTCAAATTCTGATGAAAAAGAAATCAAACATAAATCCCACTCGGAAGACACAAAGTTTACCAGTATCGGTTTGAAGTTGTCAGAAGTTGACATGATGAAGGAGAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCTGGAAAAGGGGTTTGCACTGCTTTGGCCATCTCTAATGCCATTACTAATCTGTGCGCAACTGTATTTGGGCAATTATGGAGACTAGAACCTCTACCCTCTGAGAAGAAAGAAATGTGGCAGAGAGAGATGGAATGGCTTGTTAGTGTTAGTGATTACATTGTCGAGTTGATGCCTTCTTGGCAAACATATCCTGATGGGAGTAAGCTCGAGGTAATGACTTGCAGGCCTAGGACAGATATTTTTATCAATCTTCCAGCTCTTCGCAAACTCGACAACATGCTTCTCGAAATTTTAGACAGTTTCACTGCTACAGAGTTCTGGTATGTAGACCAAGGAATTGTAGCCCCAGATGCAGATGGTTCGGCCTCTTTTCGCAAAACAATTCAGCGGCAAGAAGAGAAGTGGTGGCTTCCTGTACCTCGTGTTCCCCCAGCAGGACTCAGCGAAGACTCAAGAAAGCAGTTGAATCACTCTCGAGAATGTGCAAACCAAATACTAAAAGCAGCCATGGCTATCAACAGCATTGCTTTGGCTGAAATGGAAGTTCCTGAGTCATATTTGGAAGTTCTTCCTAAGAATGGAAGAACTTGCTTGGGGGATTTTGTTTACCGTTACATAACATCAGATCAATTCTCCCCGGAGTGCCTTCTTGATTGCTTAGACATATCCTCTGAACATGTTGCACTAGAGATTGCAAACCGTGTGGAAGCAGCAATTTATGTATGGCGCCGAAGAGCTCACTCTAGGTCCTCACCAAACCCCAACCGTTCTACCACAAAATCATCATGGGAAATAGTCAAGGACTTCATGGTTGATGGAGATAAGAGAGAACTTCTAGCAGATAGAGCTGAAAACATTCTAGTTTCCTTGAAGCAGCGGTTCCCCGGCTTAAGTCAAACTACCCTTGATACCAGCAAGATCCAATGCAACAAGGATGTTGGAAAATCCGTGCTAGAGAGCTACTCAAGAGTTTTGGAGAGCATGGCTTTCAACATTGTGGCCCGCATTGATGATTTGCTATATGTGGATGACTTGACAAAACATTCAGAGAGGTTTGCATTGGTTCCTACTACTACAGTTGATGTGGTTTCTCAACAGAAGAATACACGTCCACTCTCAGTGTCTGTCTCAGGCACTACACCACACAAAGCATCAGTTGGCACACCTAGCTTTTCACCTGCGGCTGTGCCACTAATTAGTCCTGCAAGAGGGGAGAGAACTCCTTTCCTCCACAACAACAACAACAGCATCAAACCTCATCGTCGCGGCTTTGGGGTGAGGAGAGTGTTGTCAAATTATCTTGGAGTAGAGACAAAGACTACTAAGATATGCAGCAACTCAACTGAGGTGAATTGTTCAAACCCAGGTAGCAAGAAAACTGAACAACAACGTCAGAAGCAATCATGCACACTTAAAAACAGGACCAAATGA 1785 0.4398 MDALSKKNENSQKKRDGVLSSLTTDSSAESRETSFCGSSSSVSTEEAKAKGSSSPAPLGWPILKATISKRSNSDEKEIKHKSHSEDTKFTSIGLKLSEVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPSEKKEMWQREMEWLVSVSDYIVELMPSWQTYPDGSKLEVMTCRPRTDIFINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAPDADGSASFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKQLNHSRECANQILKAAMAINSIALAEMEVPESYLEVLPKNGRTCLGDFVYRYITSDQFSPECLLDCLDISSEHVALEIANRVEAAIYVWRRRAHSRSSPNPNRSTTKSSWEIVKDFMVDGDKRELLADRAENILVSLKQRFPGLSQTTLDTSKIQCNKDVGKSVLESYSRVLESMAFNIVARIDDLLYVDDLTKHSERFALVPTTTVDVVSQQKNTRPLSVSVSGTTPHKASVGTPSFSPAAVPLISPARGERTPFLHNNNNSIKPHRRGFGVRRVLSNYLGVETKTTKICSNSTEVNCSNPGSKKTEQQRQKQSCTLKNRTK 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00206 594 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 13 529 IPR038937 GO:0005085
Pumo1g00206 594 MobiDBLite consensus disorder prediction 15 50 - -
Pumo1g00206 594 ProSiteProfiles PRONE domain profile. 89 471 IPR005512 GO:0005085
Pumo1g00206 594 FunFam Rop guanine nucleotide exchange factor 14 331 470 - -
Pumo1g00206 594 MobiDBLite consensus disorder prediction 566 594 - -
Pumo1g00206 594 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 97 465 IPR005512 GO:0005085
Pumo1g00206 594 MobiDBLite consensus disorder prediction 566 588 - -
Pumo1g00206 594 FunFam Rop guanine nucleotide exchange factor 1 91 330 - -
Pumo1g00206 594 MobiDBLite consensus disorder prediction 1 57 - -
Pumo1g00206 594 Gene3D PRONE domain, subdomain 1 93 329 - -
Pumo1g00206 594 Gene3D PRONE domain, subdomain 1 330 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00206 Pumo-Chr1 3239843 3243233 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00206 - - gmx:100796692 1090.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00206 1 3239843 3243233 Pumo1g00206 1 3239843 3243233 ECH
Pumo1g00206 1 3239843 3243233 Pumo9g02384 9 57680892 57684430 ECH
Pumo1g00206 1 3239843 3243233 Pumo9g02384 9 57680892 57684430 PCT