Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00198 ATGGAGCAAGAAATGGAGAAGAGAAAGGGAAGTAGAATTGAAGAAAAAGAGAAATGGGTGCATGATGCATCTGTGGATTATAAAGGCAGAGTTCCTCTCCGTGCTTCCACTGGTGTATGGAAAGCCTCCCTCTTTGTCCTCACAATTGAATTTAGTGAAAGGGTAAGCTACTTTGGGATAGCCACTAATCTTATCTCGTACCTGACTAAAGTGATGCATGAAGACCTCAAAACAGCAGCCAAGAATGTAAATTACTGGTCAGGAACAACAACCCTTGTGCCTCTGATTGGGGGGTTTGTTGCTGATGCCTACACTGGTCGATTTTATATGGTCCTGTTTTCTTCCTTTGTATACCTCATGATGGAGCAAGAAATGGAGAAGAGAAATGCAGGCAAAATTGAAGAAAATGAAGAGAAATGGGTGCATGATGCATCTGTGGATTATAAAGGCAGAGTTCCTCTCCGTGCTTCCACTGGTGTATGGAAAGCCTCCCTCTTTGTCCTCACAATTGAATTAAGTGAAAGAGTAAGCTACTTTGGGATAGCCACTAATCTCATCTCATACCTGACTAAAGTGATGCATGAAGACCTTGAAACAGCGGCCAAGAATGTAAACTACTGGGCAGGAGCAACAACCCTTATGCCTCTGGTTGGGGGATTTGTTGCTGATGCCTACACTGCAAACCCTCTTGGCATTGTAAAAATAGAGCAAGAAATGGAGAAGAGGAAGCAAGGTAGAAGTGAGGAAGAGAATTGGGTGCATGATGCATCTGTGGATTATAATGGAAGACTTCCTTTCCGTGCTTCCACTGGTGTATGGAAAGCTTCTCTTTTTGTTCTTACAATTGAATTTAGTGAAAGGATAAGCCACTTTGCGATGTTCTCTAATCTTATCACGTACCTGACTAAAGTGATCCATCAAGACCTCAGTACAGCTGCCAAGAGTGTAAACTACTGGGTAGGAACAACCACCCTGATGCCTCTGGTTGGAGGATTTGTTGCTGATGCCTACACTGGTCGATTTCATATGGTCATATTTTCTTCCCTCGTATACTTAATGAAAGATAACGCATGGAGATTAGCAACAGTGACAAGAGTGGAGGAGACAAAACTTGTTCTAAATGTAGTTCCCATATGGCTAACTTCATTAACAGCTGGAGTATGCTGGGCACAAGCCTCGACACTTTTTGTCAAACAAGCAACTGCTATGAACTTGAAGATAAGCGACAGTTTCACAATGCCACCAGCTTCCCTTGTTTCTGTTGCAGCAATTGGTGTCTTAATATCTCTCCCAATATACGATAGGATTATTGTTCCAATTCTGAGGAAAGTCACAGGCAATGAAAGAGGCATCAGCATCCTAAGGAGGATTGGCATTGGCTTGACATTCTGA 1392 0.4267 MEQEMEKRKGSRIEEKEKWVHDASVDYKGRVPLRASTGVWKASLFVLTIEFSERVSYFGIATNLISYLTKVMHEDLKTAAKNVNYWSGTTTLVPLIGGFVADAYTGRFYMVLFSSFVYLMMEQEMEKRNAGKIEENEEKWVHDASVDYKGRVPLRASTGVWKASLFVLTIELSERVSYFGIATNLISYLTKVMHEDLETAAKNVNYWAGATTLMPLVGGFVADAYTANPLGIVKIEQEMEKRKQGRSEEENWVHDASVDYNGRLPFRASTGVWKASLFVLTIEFSERISHFAMFSNLITYLTKVIHQDLSTAAKSVNYWVGTTTLMPLVGGFVADAYTGRFHMVIFSSLVYLMKDNAWRLATVTRVEETKLVLNVVPIWLTSLTAGVCWAQASTLFVKQATAMNLKISDSFTMPPASLVSVAAIGVLISLPIYDRIIVPILRKVTGNERGISILRRIGIGLTF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00198 463 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 38 118 - -
Pumo1g00198 463 Pfam POT family 355 463 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pumo1g00198 463 Gene3D MFS general substrate transporter like domains 11 121 IPR036259 -
Pumo1g00198 463 Gene3D MFS general substrate transporter like domains 354 463 IPR036259 -
Pumo1g00198 463 Gene3D MFS general substrate transporter like domains 244 353 IPR036259 -
Pumo1g00198 463 Gene3D MFS general substrate transporter like domains 132 230 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00198 Pumo-Chr1 3117595 3132897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00198 354 463 Organic Solute Cotransporters AT3G53960 55.856 1.67e-35 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00198 K26562 - gmx:102670061 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00198 1 3117595 3132897 Pumo1g00198 1 3117595 3132897 ECH