Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00196 ATGCAGAAGCCACCTAAGGAAATGGAGAAGAGAAAGCGAGATAAAAGTGAAGAAAATGGAGAAGAGAAATGGGTGCATGATGCATCTGTGGATTACAAGGGCAGAATTCCTCTCCGTGCTTCCACCGGTGTATGGAAAGCTTCGCTTTTTGTCCTTATAATTGAATTTAGTGAAAGGATATGCTACTTTGGGATAGCCAGTAATCTTATCATGTACCTGACTAAAGTGATGCACGAAGATCTCAAAACAGCGACCAAGAATGTAAACTACTGGTTAGGAGCAACAACCCTGATGCCTCTAATTGGGGGATCTGTTGCTGATGCCTACACAGGTCGATTTCGTATGGTCCTCTTTTCTTCCGTCGTATACCTTAAGGGATTAAGCCTCTTGACCATGTCTCAATTCATTCCAAGTCTAAAACCATGCAACGATGAGATATGTCATCAACCAAGGAAGGTTCATGAAGTGGTTTTCTTCCTTGCCCTTTACTGTATCGCCTTGGGCACTGGAGGATACAAACCTTGCTTGGAAAGCTTTGGAGCCGATCAATTTGATGATGACCACCTTGAAGAACGAAAGAAGAAGATGTCTTTCTTCAACTGGTGGACCTTTGCACTGTGTGTTGCAATGCTAATTGGGACAACAGTGGTTGTTTGTATTCAGGACTTCGTTAGCTGGGGAGTTGCTTGTCTCATCCTCACTATTTTTATGGCTCTCAATATCATTGCTTTCTATGTGGGGAAGCCTTTTTACAGGTACAGGAGGCCAGAAGGAAACCCTTTAATGCCAATTCTACAAGTCCTAATTGCGGCCATAAGGAAAAGGAATCTGTCTTGTCCTTCAAATCCTGCTCTATTGTATCAAGTCCCACACTCACAGAAATCCCAAGGAAGGCTTCTAAACCATACTAGCAGGCTAAGGTTTCTTGACAAGGCTGCAATAGTGGAAGAGAAGTATATTGAGCAGAAAGACAATCCATGGAGATTGGCAACAGTGACAAGAGTGGAGGAGACAAAGCTTATTCTGAATGTTGTTCCCATATGGCTAACTTCATTAATAATTGGTGTATGTATAGCGCAAGGCTCGACACTCTTTGTCAAACAAGCAGCTGCTATGAACTTAAAGATAAGCAACAGCTTCAGAATCCCACCAGCTTCCATTGCGTCTGTTTCAGCTATTAGCTCTATAATATCTGTCCCAATATATGATAAGATTATAGTTCCAATTATGAGGAAAGTCACAGGTAACGAAAGAGGCATCAGCATCCTTAGGAGGATTGGCATTGGCTTAGCATTCTTAGTCATAGCCATGGTTGTTGCTGCCTTAGTAGAAACAAAGAGATTAAGAATGGTTGAACATGAAGTCCTAACAGTAGGGGGAACTAGGCATGACACTATGAGTGTGTTGTGGTTAATACCCCAATACTTTATCCTTGGTATTGGAGGAGATTCATTGTCTCTAATTGGTTTGCAAGAATATTTCTATGACCAAGTTCCAGACTCAATGAGAAGCTTAGGAATGGCTTTGTATCTCAGTGTGCTTGGAGTAGGATTCTTCTTAAGCAGCTTTCTAATCATCGTTGTGGACCATGTCACGGGGAAGAATGGCAAAAGTTGGATTGCAAAAGATATAAATTCAAGTCGTCTAGATAAATTTTATTGGATGTTGGCTGTCATAAATGCTTTAAATTTGTGTCTCTTTCTATTCTTGGCAAAGAGGTACACTTATAAAACCGTACAAAGGAAAACTACGGAAATTTGTAACAGTGATGGGGTGGAGACAATGGCATCATGA 1794 0.4125 MQKPPKEMEKRKRDKSEENGEEKWVHDASVDYKGRIPLRASTGVWKASLFVLIIEFSERICYFGIASNLIMYLTKVMHEDLKTATKNVNYWLGATTLMPLIGGSVADAYTGRFRMVLFSSVVYLKGLSLLTMSQFIPSLKPCNDEICHQPRKVHEVVFFLALYCIALGTGGYKPCLESFGADQFDDDHLEERKKKMSFFNWWTFALCVAMLIGTTVVVCIQDFVSWGVACLILTIFMALNIIAFYVGKPFYRYRRPEGNPLMPILQVLIAAIRKRNLSCPSNPALLYQVPHSQKSQGRLLNHTSRLRFLDKAAIVEEKYIEQKDNPWRLATVTRVEETKLILNVVPIWLTSLIIGVCIAQGSTLFVKQAAAMNLKISNSFRIPPASIASVSAISSIISVPIYDKIIVPIMRKVTGNERGISILRRIGIGLAFLVIAMVVAALVETKRLRMVEHEVLTVGGTRHDTMSVLWLIPQYFILGIGGDSLSLIGLQEYFYDQVPDSMRSLGMALYLSVLGVGFFLSSFLIIVVDHVTGKNGKSWIAKDINSSRLDKFYWMLAVINALNLCLFLFLAKRYTYKTVQRKTTEICNSDGVETMAS 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00196 597 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 43 576 - -
Pumo1g00196 597 Pfam POT family 113 536 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pumo1g00196 597 SUPERFAMILY MFS general substrate transporter 38 577 IPR036259 -
Pumo1g00196 597 Gene3D MFS general substrate transporter like domains 16 584 IPR036259 -
Pumo1g00196 597 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00196 Pumo-Chr1 3062959 3088395 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00196 8 594 Organic Solute Cotransporters AT3G53960 55.109 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00196 K26562 - gmx:100804663 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00196 1 3062959 3088395 Pumo1g00196 1 3062959 3088395 ECH