Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00185 ATGACCGGCGATTTTCTCCGGACACCCCTCACACTCAAGATCGCTGCATTCTTCTTCATTGCCGTCACTTTCTTCTACTTCGGCAAGCACTGGTCCGATGGCTACCAGCAGCTCGTATTCTTCACCCAAGGATCCGACCCGGATCAGAACTCCAACCAGGCCGTGTCCACGTCCCCGAATTACGCCAAGTCCTTCAACATCTCCGCCCTAATCGACCAGAACAACACGCAACCGGCGCCGGAAAATGCCCCCCCGCCGCCGCCGCAGCCGGAGGGGTCAATCGAGAAACTGGGGGTCGTGAACGAGAATGGCGCGATGTCCGATGAGTTCGAGGTGGGGGATTTCGATCCGGGAATGGTGGATCAGTGGGTGAACGAGACTCAGGTTGATGAGAGCGAGGGTTCTTCTTCTTCTTCTTCTTCTTCTGATGTTGGATTTGGGATCAAGAAGTTCGGGTTGTGCCCGCGCGAGATGAGCGAGTATATACCGTGTTTGGATAACGAGGACGCGATTCGGAAGCTGCCTTCCACGGAGAAAGGGGAGAGGTTCGAGCGGCATTGCCCTGAGCAAGGTCAAGGGTTGAATTGCTTGGTTCCTGCACCCAAAGGGTACCGTACCCCTATTCCATGGCCCAGAAGCCGAGATGAGGTATGGTACAATAATGTTCCTCATACACGTCTTGTTGAAGATAAAGGAGGCCAAAACTGGATTTCCAGAGACAAGGATAAGTTTAAATTCCCCGGTGGTGGTACACAGTTTATACATGGGGCAAATGAATACTTGGACCATATTTCTAAGATGATTCCTGATATTACATTTGGTAAGCATATAAGGGTTGTTCTTGATGTTGGCTGTGGCGTTGCTAGTTTTGGTGCGTACTTACTGTCACGCAATGTCGTCACCGTGTCTGTTGCTCCCAAGGATGTTCATGAGAATCAGATTCAGTTTGCTCTTGAGCGTGGCGTACCGGCAATGGCAGCGGCATTTGCTACTAGACGATTGTTATATCCAAGTCAAGCTTTTGACTTGGTACATTGTTCACGCTGTAGAATTAATTGGACTAGAGATGATGGGATACTGCTGCTTGAAGTTAATAGGATGCTAAGAGCAGGAGGGTACTTTGTCTGGGCTGCCCAGCCAGTTTATAAGCATGAAGAAGTTTTAGAAGAACAATGGGAAGAGATGCTTAATCTTACCACGCGACTCTGCTGGAATTTTTTGAAAAAAGATGGGTACATTGCAATATGGCAGAAACCTTCTGACAATAGTTGCTATCTAGACCGTGAGGCAGGAACTAAACCTCCTATGTGTGACCCAAGTGATGACCCAGACAATGTTTGGTATGTTGATCTTAAAGCATGCATCTCTGAATTGCCTAAGAACGGATATGGGGCAAATGTTACTGAATGGCCTGCACGTTTGCAAAACCCCCCTGATAGGCTTCAAAGCATAAAGCTTGATGCTTTCACGTCCAGATCAGAGCTTTTTAGGGCAGAATCAAAATACTGGAATGAAATAATAGCAAGCTATGTTCGCGTTTTACACTGGAAAAAAATGAGATTAAGAAATGTTATGGACATGCGAGCAGGTTTTGGAGGATTTGCAGCAGCATTGATTGATCAGAATCTTGACAGCTGGGTTATGAATGTTGTTCCTGTTAGTGGTCCAAACACCTTGCCTGTTATATATGACCGCGGATTGATTGGAGTTGTGCATGACTGGTGTGAGGCATTTGACACCTACCCAAGAACCTATGATTTACTGCATGCAGCAAACCTACTTTCTGTCGAGAAAAAAAGATGCAATGTCTCATCCATTATGCTTGAGATGGATCGGATACTAAGACCCGGTGGACATGTATACATCCGCGATTCTCTTGATATCATGGATGAACTTCAAGAGATTGCCAAGGCAATAGGCTGGCACGTGATGTTGCGAGACACGGAGGAGGGGCCTCATGCAAGTTATAGGGTATTGGTTTGTGATAAGCACTTGCTACGCTCTTAA 2007 0.4709 MTGDFLRTPLTLKIAAFFFIAVTFFYFGKHWSDGYQQLVFFTQGSDPDQNSNQAVSTSPNYAKSFNISALIDQNNTQPAPENAPPPPPQPEGSIEKLGVVNENGAMSDEFEVGDFDPGMVDQWVNETQVDESEGSSSSSSSSDVGFGIKKFGLCPREMSEYIPCLDNEDAIRKLPSTEKGERFERHCPEQGQGLNCLVPAPKGYRTPIPWPRSRDEVWYNNVPHTRLVEDKGGQNWISRDKDKFKFPGGGTQFIHGANEYLDHISKMIPDITFGKHIRVVLDVGCGVASFGAYLLSRNVVTVSVAPKDVHENQIQFALERGVPAMAAAFATRRLLYPSQAFDLVHCSRCRINWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHEEVLEEQWEEMLNLTTRLCWNFLKKDGYIAIWQKPSDNSCYLDREAGTKPPMCDPSDDPDNVWYVDLKACISELPKNGYGANVTEWPARLQNPPDRLQSIKLDAFTSRSELFRAESKYWNEIIASYVRVLHWKKMRLRNVMDMRAGFGGFAAALIDQNLDSWVMNVVPVSGPNTLPVIYDRGLIGVVHDWCEAFDTYPRTYDLLHAANLLSVEKKRCNVSSIMLEMDRILRPGGHVYIRDSLDIMDELQEIAKAIGWHVMLRDTEEGPHASYRVLVCDKHLLRS 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00185 668 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 184 403 IPR029063 -
Pumo1g00185 668 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 83 666 IPR004159 GO:0008168
Pumo1g00185 668 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 160 663 IPR004159 GO:0008168
Pumo1g00185 668 MobiDBLite consensus disorder prediction 74 95 - -
Pumo1g00185 668 FunFam probable methyltransferase PMT3 256 419 - -
Pumo1g00185 668 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 498 643 IPR029063 -
Pumo1g00185 668 Gene3D Vaccinia Virus protein VP39 257 421 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00185 Pumo-Chr1 2949598 2954866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00185 - - gmx:100800414 1279.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00185 1 2949598 2954866 Pumo1g00185 1 2949598 2954866 ECH
Pumo1g00185 1 2949598 2954866 Pumo9g02413 9 58261100 58263756 PCT