Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00184 ATGAGTACACATAGTATGTTGGATATTGTGGTAAAAGATATACTTCGGGTGGTCACACCATTACAAGAAGATTGGGAGATACGATTTGCAATTATTAATGATTTACGAAGCATTGTTGAATCTGTGGAAAGCCTGAGAGGAGCAACTGTTGAGCCATTTGGGTCATTTGTATCTAATCTCTTCACACGATGGGGTGACTTGGATATTTCAATTGAGCTATCAAATGGTTTGCATATTTCATCTGCTGGGAAAAAACAAAAACAAACTTTATTGAGGGATGTTTTAAATGCTTTGAGCATGAGAGGTGGAGGGAGCAACTTGCAGTTCATCTCCAATGCACGAGTTCCCATTTTAAAATTTAAAAGCAACCGGCAGGGTGTATCTTGTGACATTTCAATTAATAACCTGCCGGGCCAAATGAAATCCAAGATTTTGCTTTGGATCAACAAGATAGATGGCCGTTTTCGTCCTATGGTTTTACTGGTCAAGGAGTGGGCCAAAGCACATAAAATCAATAACTCGAAGGCTGGAACTTTTAACTCCTATTCGCTAAGTTTGCTTGTGATATTTTATTTTCAGACATGTATTCCTGCAATTTTACCACCGCTTAAAGATATATACCCTGGCAACATGGTTGATGATCTTAGAGGTATTAGAGCTGATGCAGAGAATCTTATTGCAGAAACATGTGATGCTAACATAAACCGGTTCATATCAAACAGGGCAAGGTCAATTAACAGAAAATCTGTGGCTGAACTTTTTGTTGAATTCGTAGGAAAGTTTGCTAAGATGGATTCATTGGCCCCGAAGATGGGAATTTGCCCCTATACTGGACAATGGGAAGAGATAGAGAACAATACGATTTGGTTACCCAAGACTTACGCAATATTTGTTGAGGATCCTTTTGAGCAGCCACAAAATACTGCAAGATCCGTCAGTGCAGGACAACTGAAGAAGATAACCGAGGCATTTTCAAGGACGCACGACTTACTTACCTCAACAAATCAGAATCAAATTTCACTTTTGAGCAACATAGCACCACTACATGTAATAAGATGTATCACAAGGCCTCCTCCTATCAGAGATTACGGTGGTTACTTCCACCCAACTCAGCCTCATGTGCAGAGGGGTGGAGGTTACTTTCACCCAACTCAGCCACAAGCGTTCCACCCAACTCAACCACGAGTACAGAGGGCCATACGCTCGCGACAGCAGTCACAACATCATTTTCAAAATGCCAGTCAAGGAACAAGCTCCAACAGTTCATCTTCAAATGGACATATACACTGA 1290 0.4093 MSTHSMLDIVVKDILRVVTPLQEDWEIRFAIINDLRSIVESVESLRGATVEPFGSFVSNLFTRWGDLDISIELSNGLHISSAGKKQKQTLLRDVLNALSMRGGGSNLQFISNARVPILKFKSNRQGVSCDISINNLPGQMKSKILLWINKIDGRFRPMVLLVKEWAKAHKINNSKAGTFNSYSLSLLVIFYFQTCIPAILPPLKDIYPGNMVDDLRGIRADAENLIAETCDANINRFISNRARSINRKSVAELFVEFVGKFAKMDSLAPKMGICPYTGQWEEIENNTIWLPKTYAIFVEDPFEQPQNTARSVSAGQLKKITEAFSRTHDLLTSTNQNQISLLSNIAPLHVIRCITRPPPIRDYGGYFHPTQPHVQRGGGYFHPTQPQAFHPTQPRVQRAIRSRQQSQHHFQNASQGTSSNSSSSNGHIH 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00184 429 PANTHER POLY A POLYMERASE CID PAP -RELATED 5 421 - -
Pumo1g00184 429 Gene3D - 144 346 - -
Pumo1g00184 429 CDD NT_PAP_TUTase 27 148 - -
Pumo1g00184 429 MobiDBLite consensus disorder prediction 386 429 - -
Pumo1g00184 429 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 337 - -
Pumo1g00184 429 Gene3D Beta Polymerase, domain 2 22 143 IPR043519 -
Pumo1g00184 429 Pfam Nucleotidyltransferase domain 36 132 IPR002934 GO:0016779
Pumo1g00184 429 MobiDBLite consensus disorder prediction 376 429 - -
Pumo1g00184 429 SUPERFAMILY Nucleotidyltransferase 6 147 IPR043519 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00184 - - gmx:100791794 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00184 1 2939142 2945745 Pumo1g00184 1 2939142 2945745 ECH