Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00178 ATGGCTCTTGTTCTCAACGTCTCATTGTGTTCCACTTCTAAACCCCATCTTTCTCTCTCAACCTCCAATTCCAAAGCTTCTACTCTTCCTCTTTTGGGACTCAACACAAAGCAAAGTCGCCAAGCATCTCAGAAACTCACATTTTCATTGGGTGAATCCGTGTCTAGTGCCACCCTCGTTGCTCTCCTCTCTGCTTCTTTCATCTTTGTTGATCCCGCACTTGCATTCAAGGGTGGAGGGCCATACGGACAAGAAGTGACAAGGGGACAAGATCTCACTGGGAAGGACTTCAGTGGCAAAACTCTGATCAAACAAGACTTCAAAACGTCCATACTCAGACAAGCCAATTTTAAAGGTGCAAAGTTAATAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTGCTGATCTTTCAGATGCTGATCTTAGAAATGCAGATTTTTCCTTGGCAAATGTGACAAAGGCAAATTTAAGCAATGCTAACTTGGAAGGTGCACTTGCAACAGGAAATACATCTTTTAGGGGATCAAATATTACAGGCGCTGACTTCACGGATGTACCACTAAGAGAAGATCAACGTGAATACCTATGCAAAGTTGCTGATGGAGTGAACCCAACAACCGGAAATGCTACGCGCGATACATTGTTCTGCAATTAG 657 0.4353 MALVLNVSLCSTSKPHLSLSTSNSKASTLPLLGLNTKQSRQASQKLTFSLGESVSSATLVALLSASFIFVDPALAFKGGGPYGQEVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLIGASFFDADLTGADLSDADLRNADFSLANVTKANLSNANLEGALATGNTSFRGSNITGADFTDVPLREDQREYLCKVADGVNPTTGNATRDTLFCN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00178 218 SUPERFAMILY Pentapeptide repeat-like 84 189 - -
Pumo1g00178 218 FunFam thylakoid lumenal 15 kDa protein 1, chloroplastic 75 218 - -
Pumo1g00178 218 Gene3D - 75 218 - -
Pumo1g00178 218 PANTHER THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTIC 1 218 IPR044213 -
Pumo1g00178 218 Pfam Pentapeptide repeats (8 copies) 130 165 IPR001646 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00178 - - gmx:100806792 394.43