Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00169 ATGGCTGCCTCCGTCTCCACTGTCGGAGCTGTCAACAGAACTCTTTTGAACCTGAATGGGTCTGGAGCAGGAGTTTCAGCTCCCAGTTCAGCCTTCTTTGGAAGCAGCTTGAAGAAGGTTATTGCCTCAAGGGTCCCCAACAGCAAGGTTTCCTCTGGAAGCTTGAAGATTGTTGCTGCAGACAAAGAGATTGAGGAGACCCAGCAGACCGAGAAGGACAGATGGAGGGGTCTGGCCTACGATATTTCAGATGACCAACAAGACATCACAAGGGGGAAGGGTTTGGTTGATTCCCTTTTCCAAGCTCCAATGGAGACTGGAACTCACTATGCTGTCATGAGCTCCTACGAGTACATTAGCACTGGACTTCGCCAGTACAACTTGGACAACAACATGGATGGGTTTTACATTGCTCCAGCTTTTATGGACAAGCTTATTGTTCACATCACCAAGAACTTCATGACCCTGCCCAACATCAAGGTTCCTCTCATTCTTGGTATCTGGGGAGGCAAGGGACAAGGAAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCAGGAGAGCCAGCAAAATTGATCAGGCAGAGATACCGTGAAGCTGCAGACATGATCAAGAAGGGAAAGATGTGCGCTCTGTTCATCAACGATCTGGATGCAGGAGCTGGTCGTCTTGGTGGAACCACCCAATACACTGTGAACAACCAGATGGTGAATGCCACTCTCATGAACATTGCTGATAACCCCACAAATGTGCAGCTTCCCGGTATGTACAACAAGGAAGAGAACCCCCGTGTCCCCATCATCGTCACTGGTAACGATTTCTCAACATTGTATGCTCCTCTCATCCGTGATGGCCGTATGGAGAAGTTCTACTGGGCACCAACAAGGGAAGACCGTATTGGTGTTTGCACTGGAATTTTCCGCACTGATGGTATTCCTGAACAGGACATTGTCAAGCTTGTTGACACCTTCCCTGGCCAATCCATTGATTTCTTTGGTGCACTGAGGGCCAGAGTATATGATGATGAAGTGAGGAAGTGGATCTCTGGTGTTGGTGTTGACGGTGTTGGGAAGAAGCTTGTGAACTCAAAAGATGGACCTCCTACCTTTGAGCAGCCCAAGATGACTTTGGACAAGCTCTTGCTGTATGGTAACATGCTTGTCCAAGAACAAGAGAATGTCAAGAGAGTCCAATTGGCTGACAAGTACTTGAACGAGGCTGCTCTTGGAAATGCTAACGAAGATGCTATTAAGAGTGGAACTTTCTACAAATCTACTTAG 1332 0.476 MAASVSTVGAVNRTLLNLNGSGAGVSAPSSAFFGSSLKKVIASRVPNSKVSSGSLKIVAADKEIEETQQTEKDRWRGLAYDISDDQQDITRGKGLVDSLFQAPMETGTHYAVMSSYEYISTGLRQYNLDNNMDGFYIAPAFMDKLIVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDGIPEQDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDGVGKKLVNSKDGPPTFEQPKMTLDKLLLYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGTFYKST 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00169 443 Pfam ATPase family associated with various cellular activities (AAA) 167 308 IPR003959 GO:0005524|GO:0016887
Pumo1g00169 443 Gene3D - 312 424 - -
Pumo1g00169 443 Gene3D - 127 311 IPR027417 -
Pumo1g00169 443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 336 IPR027417 -
Pumo1g00169 443 PANTHER - 15 428 IPR044960 -
Pumo1g00169 443 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 127 311 - -
Pumo1g00169 443 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 312 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00169 Pumo-Chr1 2771603 2774842 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00169 - - gmx:100797222 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00169 1 2771603 2774842 Pumo1g00169 1 2771603 2774842 ECH