Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00167 ATGCCTACTTCCTCACATTACTTCATTTTCTTCTGCATTCTAGTCTCCATCTCCCTCACAGATGGAACACAACTCATAATAGTAAACAATTGCAAAGAAAGTGTATGGCCAGGAATTCTCGGCAATGGAGGACACCCTTCACCTAAACATGGAGGGTTTCACCTTGGAAGCGGTGAAGAGGTTGTTATCCAAGTCCCTAAGGGTTGGTCAGGGAGAATCTGGGGCAGACAAGGGTGTTGCTTCGACCAACAAACAGGCAAAGGTTCATGTCAAACAGGTGATTGTGGAGACCTATTACAATGCAATGGCATTGGTGGAGTCCCTCCAGCTACACTCGTAGAAATGACCCTTGGAACCTCTCAATCATCATTGCATTTCTATGATGTTAGTTTGGTTGATGGGTTTAACCTTCCAGTGTCAATGAAGCCTGTGGGAGGTGGTGGTGCAGGTTGTGGTGTTGCGGGGTGTGAGGTTAACTTGAATATTTATTGCCCCTCTGCTTTGGTTGTGGAGGGGAATGGGAAGGTTGTGGGGTGCAAGAGTGCTTGCTTGGCTGCAAAGTCAGATAGGTATTGCTGCACTGGTGAGTTTGCTGGAAGATGCAAGCCAACTGTGTTTGCTCGTCTTTTCAAGACTGTTTGTCCAAATGCTTATAGCTATGCTTATGATGATTCTGCAGTGCTCAAGACTTGTGTGGCACCTCGCTATGTCATTACATTTTGCCCTCCACACTGA 735 0.4639 MPTSSHYFIFFCILVSISLTDGTQLIIVNNCKESVWPGILGNGGHPSPKHGGFHLGSGEEVVIQVPKGWSGRIWGRQGCCFDQQTGKGSCQTGDCGDLLQCNGIGGVPPATLVEMTLGTSQSSLHFYDVSLVDGFNLPVSMKPVGGGGAGCGVAGCEVNLNIYCPSALVVEGNGKVVGCKSACLAAKSDRYCCTGEFAGRCKPTVFARLFKTVCPNAYSYAYDDSAVLKTCVAPRYVITFCPPH 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00167 244 ProSiteProfiles Thaumatin family profile. 25 244 IPR001938 -
Pumo1g00167 244 FunFam Thaumatin-like protein 1a 23 242 - -
Pumo1g00167 244 SMART tha2 25 242 IPR001938 -
Pumo1g00167 244 SUPERFAMILY Osmotin, thaumatin-like protein 24 243 IPR037176 -
Pumo1g00167 244 PANTHER OS03G0233200 PROTEIN 13 242 IPR001938 -
Pumo1g00167 244 CDD TLP-PA 24 241 - -
Pumo1g00167 244 Pfam Thaumatin family 29 242 IPR001938 -
Pumo1g00167 244 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Pumo1g00167 244 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Pumo1g00167 244 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Pumo1g00167 244 PRINTS Pathogenesis-related protein signature 232 241 IPR001938 -
Pumo1g00167 244 PIRSF PR5 2 244 IPR001938 -
Pumo1g00167 244 Gene3D Thaumatin 24 242 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00167 Pumo-Chr1 2746001 2747371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00167 5 242 Receptor kinase-like Gene Family AT5G38280 41.870 1.01e-50 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00167 - - gsj:114381056 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00167 1 2746001 2747371 Pumo1g00167 1 2746001 2747371 ECH