Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00165 ATGGAGGAACCAAACTCGTGTTTCTTCAACCCTGCAATTTTGGATTCCCTCACTCAGGATTCGGTGAACGAAATCCTCGACAGCTACAATGGCTTCTGCAACGCTACGCAATCCCTTCTAGCTGGTAACGGCGATCTCTCTGTCGGTCCCGACTTCGTTTCTCACGTTCACTCTCTCTGCAAGCACCGCCTCCATTCCCTGGTTCAAGATCACTTTTTTCGACTCCTAGAGGAGACGTTTGAACGAAATGGGGCATCGAGATTTTGGCGCCATTTTGATCCTTATTCTCATGTTGCGGGTTTGAATAAGAATGATGACCTTGATATTGATGAGGATGAGATTCAGAGTGTGTTGTATAATGCTTTGGAAGAGATTACTTTGGAGAAACAATATCAGGAGAAATGTCTGTTGATGTTGGTGCATGGTTTGCAATCTTACAAGGACCTGGTGTCAGAGGATAAGCATGGTTTCGAAGGAGAAAGAAATTACCTTACCTCTAAGTATCAATGGATTGTCTCTTCTGTACTTATGGCCTCGCTTCCTCGGCATTTCCCTGTTATACTGCATTGGTATTTCAAAAGAAAACTAGAGGAGTTAAGTACAATTATGGATGGAGAGTTCGGTGATGATGCATCTCAAAATAAGGATGGCATGGTTTTAGATGAAAAAGGAAAAATATGCAACAAAGTTGGTGAAATGGATGTTGATGAGTGCTATAATGACCATAGGTTCTCGGAAAACAGTAGACTTGTGAAGAACATTGGAAAAGTTGTTCTTGATCTTAGGAATCTTGGATTTACTTCCATGGCTGAAGATGCTTATGCTTCTGCTATATTTTTACTACTGAAGGCAAAAGTATATGATGTAGCTGGTGATGATTTTCGGAGTTCTGTTTTACAATCTATTAAAAGCTGGATACAGGCTGTTCCTCTTCAGTTTCTGCATGCGCTTCTTGTTTATCTTGGTGACATCGTTAGTTATGAGAGTACTTCATCAGGTCTGAAATCACCTTTGGCACCACAACCATCTTCATGCTGTCCTGGAATTGATACTCCTTCTGAAGGGCTTGTGAGATGGAAGTTGCGGCTGGAATATTTTGCATATGAAACACTACAAGATTTAAGAATAGCCAAATTATTTGAGATAATTGTTGATTATCCTGAGAGCTCTCCTGCAATTGAAGACTTAAAATTGTGTCTTGATTACACTGGACAACATTCAAAGCTGGTGGAATCATTTATTTCAGCACTGCGTTATCGCTTGCTTACTGCAGGCGCATCAACCAATGATATATTACACCAATATGTTTCAACTATTAAAGCACTTAGGACAATAGACCCTGCAGGTGTTTTCCTTGAGGCAGTTGGTGAACCCATAAGGGATTATTTAAGAGGAAGGAGGGATACCATAAAGTGCATAGTAACAATGCTTACAGATGGGACTGGTGCACATTCAAGTTCATCTGGAAATCCTGGAGATAGCCTTCTCGAAGAGTTGAACAGAGATGAAGAGATTCAAGGGAATGCTGGTGTTGATGATGATTTTAACACTGATGATAGGCAAGCATGGATCAATGCCATGCGATGGCAACCTGACCCTGTGGAAGCAGATCCATTAAAGGGAAGCAGAAACCAAAGGAAGGTTGACATACTTGGGATGATTGTTGGCATAATTGGTTCAAAAGATCAATTAGTTCATGAATATCGAACTATGCTTGCCGAGAAACTTCTAAATAAATCAGATTATGATATTGATTCAGAGATACGTACTCTAGAACTTCTCAAGATACACTTTGGAGAGAGCAGCTTACAGAAATGTGAGATTATGCTCAATGATTTAATTGGCTCAAAGAGAACCAACAGTAACATTAAAGCTACCATAAATCAGCCATCTCAGACAAGTGTTGAAGTGGGAGACAGTGCAATATCCATGGATGTAATTTCTGCTACTATCATATCTTCTAATTTCTGGCCTCCAATACAGGATGAGCCCCTTAACCTGCCTGAACCTGTTGACCAGCTCCTATCTGATTATGCAAAGAGATTTAATGAAATCAAAACTCCTCGTAAGCTGCAGTGGAAAAAAAGTCTTGGAACCATCAAGCTGGAGTTGCAGTTTCAAGATAGGGAAGTGCAATTCACAGTAGCCCCTGTTCATGCATCTATCATTATGAAATTTCAAGATCAACCAAGTTGGACCTCTAAAAACCTTGCAGCTGCTATTGGGATACCTGCAGATGTTTTAAATCGGAGAATAAATTTCTGGATTAGCAAGGGAATCATTGCAGAGTCGCAAGGGGCAGATTCCTCTGACCATGTATATACCATTGTGGAAAACATGGCTGAGACAAGTAAGAATGGAGCCAGTACTGGTTGTACTCAGGAACTTCTAGGAGGCGAAGAGGAGGAAGAGAGATCTGTGGCCTCTGTGGAAGATCAACTTCGTAAGGAAATGACTGTATATGAGAAATTTATCCTGGGGATGCTCACAAACTTTGGTAGCATGGCATTAGATCGAATTCACAATACTCTCAAGATGTTTTGCATTGCGGATCCCCCATATGACAAGTCACTCCAGCAACTACAAAGCTTTTTATCTGGTCTAGTCTCTGAGGAGAAGTTAGAACTTCGGGATGGAATGTACTTTCTAAAGAAGTAG 2658 0.4082 MEEPNSCFFNPAILDSLTQDSVNEILDSYNGFCNATQSLLAGNGDLSVGPDFVSHVHSLCKHRLHSLVQDHFFRLLEETFERNGASRFWRHFDPYSHVAGLNKNDDLDIDEDEIQSVLYNALEEITLEKQYQEKCLLMLVHGLQSYKDLVSEDKHGFEGERNYLTSKYQWIVSSVLMASLPRHFPVILHWYFKRKLEELSTIMDGEFGDDASQNKDGMVLDEKGKICNKVGEMDVDECYNDHRFSENSRLVKNIGKVVLDLRNLGFTSMAEDAYASAIFLLLKAKVYDVAGDDFRSSVLQSIKSWIQAVPLQFLHALLVYLGDIVSYESTSSGLKSPLAPQPSSCCPGIDTPSEGLVRWKLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKLCLDYTGQHSKLVESFISALRYRLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRRDTIKCIVTMLTDGTGAHSSSSGNPGDSLLEELNRDEEIQGNAGVDDDFNTDDRQAWINAMRWQPDPVEADPLKGSRNQRKVDILGMIVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLIGSKRTNSNIKATINQPSQTSVEVGDSAISMDVISATIISSNFWPPIQDEPLNLPEPVDQLLSDYAKRFNEIKTPRKLQWKKSLGTIKLELQFQDREVQFTVAPVHASIIMKFQDQPSWTSKNLAAAIGIPADVLNRRINFWISKGIIAESQGADSSDHVYTIVENMAETSKNGASTGCTQELLGGEEEEERSVASVEDQLRKEMTVYEKFILGMLTNFGSMALDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGMYFLKK 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00165 885 Gene3D Cullin; Chain C, Domain 2 644 786 - -
Pumo1g00165 885 Gene3D Cullin Repeats 529 630 - -
Pumo1g00165 885 SUPERFAMILY "Winged helix" DNA-binding domain 814 884 IPR036390 -
Pumo1g00165 885 Pfam Cullin family 547 753 IPR001373 GO:0006511|GO:0031625
Pumo1g00165 885 FunFam Anaphase-promoting complex subunit 2 646 790 - -
Pumo1g00165 885 SMART cul_2 549 706 IPR016158 -
Pumo1g00165 885 Pfam Anaphase promoting complex (APC) subunit 2 824 881 IPR014786 -
Pumo1g00165 885 Gene3D - 800 885 IPR036388 -
Pumo1g00165 885 ProSiteProfiles Cullin family profile. 553 756 IPR016158 -
Pumo1g00165 885 FunFam Anaphase-promoting complex subunit 2 517 630 - -
Pumo1g00165 885 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 24 884 IPR044554 -
Pumo1g00165 885 SMART APC2_2 824 883 IPR014786 -
Pumo1g00165 885 SUPERFAMILY Cullin homology domain 526 779 IPR036317 -
Pumo1g00165 885 FunFam Anaphase-promoting complex subunit 2 800 885 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00165 K03349 - gmx:100785428 1675.99