Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00141 ATGGGAAACGCTATGGGGAGTAAAAAAGCAAAGGTGATGAAAATAGATGGTGAAACGTTCAAGCTGAAGACTCCAGCTAGAGCAAACGACGTCGTTAAGGACTACCCCGGTCATGTTCTCTTGGACTCTCACGCGGTGAAAAACTTCGGGCCTCGGGCCAAGCCACTTGAACCCGACCACGAGCTCAAGCCCAAGAAGATTTATTTCTTGGTGGAGTTACCGAAGGTTCAGCCCTGA 237 0.4979 MGNAMGSKKAKVMKIDGETFKLKTPARANDVVKDYPGHVLLDSHAVKNFGPRAKPLEPDHELKPKKIYFLVELPKVQP 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00141 78 Pfam PADRE domain 1 76 IPR025322 -
Pumo1g00141 78 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00141 Pumo-Chr1 2383282 2383518 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00141 - - gmx:100779537 158.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00141 1 2383282 2383518 Pumo1g00141 1 2383282 2383518 ECH
Pumo1g00141 1 2383282 2383518 Pumo9g02443 9 58740517 58743703 ECH
Pumo9g02443 9 58740517 58743703 Pumo1g00141 1 2383282 2383518 ECH
Pumo1g00141 1 2383282 2383518 Pumo9g02443 9 58740517 58743703 PCT