Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00135 ATGGGAGATCCAGCTGAGAGCTTGGGATCGGAGGGTTTGGACTCCGGCGCCGCCGTTAAGACCGACGACTTGTGCATGGAAATCGATCCTCCATTTCAGGAAAACGTCGCCACCGCCGAGGACTGGCGGAAAGCCCTCAACAGAGTCGTCCCCGCCGTCGTCGTCCTCCGGACCACCGCTACTCGCTCCTTCGACACCGAGTCCGCCGCCGCCAGCTACGCCACCGGCTTCATCGTCGACAAGCGCCGCGGCATCATTCTCACCAATCGTCACGTCGTCAAGCCAGGTCCTGTGGTTGCCGAAGCCATGTTTCTGAACCGCGAAGAGGTTCCGGTGCATCCGATTTACAGAGATCCGGTACATGATTTTGGGTTCTTTCGTTATGATCCTGGCGCTATACAATTTCTGAACTATGAGGAGATACCTCTTGCTCCTGAAGCTGCCTCTGTTGGACTAGAAATCAGAGTTGTTGGTAATGATAGTGGTGAGAAGGTTTCCATTTTGGCTGGTACTCTTGCTCGTTTGGATAGGGATGCTCCTCACTATAAGAAGGATGGGTATAACGACTTCAACACATTCTATATGCAAGCAGCATCTGGGACCAAAGGAGGGTCAAGTGGTTCCCCAGTTATAGATTGGCAAGGCAGGGCAGTGGCCCTGAATGCTGGGAGCAAGTCATCAAGTGCATCAGCATTCTTTCTACCTCTAGAACGAGTTGTGAGGGCATTGAGGTTTCTTCAAAAGGGAAGTGAAACTTATGTTGATAAATGGAAGGCAGTTTCTATACCTCGTGGTACGCTTCAGGTGACATTTCTCCATAAAGGGTTTGATGAGACTCGTCGACTTGGCCTCAAAAGTGAGACCGAGCAGATAGTACGTCATGCTTCTCCAGCTGGTGAAACTGGAATGCTTGTTGTGGACTCTGTGGTGCCAGGTGGTCCGGGTTATAAACATTTGGAACCGGGTGATGTACTTGTTCGTGTCAATGGAGAAGTCATTACTCAATTCCTGAAACTGGAGACTCTACTTGATGACAGTGTAAACAAGAATATTGAATTACAAATTGAAAGGGGTGGCACATCAAAGAGTTTAACTTTGTTGGTGCAAGATTTGCACTCAATAACACCTGATTATTTCTTAGAAGTGAGTGGGGCAGTAATACATCCTCTTTCTTATCAGCAGGCTAGAAACTTCCGTTTCCATTGTGGTCTTGTTTATGTGGCTGAACCAGGATATATGCTCTTCAGAGCAGGAGTTCCTCGCCATGCAATAATTAAGAAATTTGCTGGTGAAGAAATATCTTGTCTTGACGAACTAATATCAGTTCTTTCTAAGCTATCCAGGGGTGCTCGAGTACCATTGGAATATATAAGCTACATGGATCGTCATCGAAGGAAGTCTGTGTTGGTGACGGTTGATCGGCATGAATGGTATGCACCTCCCCAGATATACACTCGTGATGACAGTACTGGCCTTTGGATTGCTAAGCCTGCTTTTCATTTTGATTCCCCCTTTCTATCATCGGGTGCTAAAGATGTTGAAAATCTGTCTAGACAGCCAGTTTCACTAACTGGTGAGCATGCCTGTGGGGGACATGTGTGTGGAGATAACAGTCAGGAGTTGGTTGATGGTGTCACTAGCATGGAAACCAATTATGAAGATCCTTCAGAGTGTGTATCTAACCACAATGCATCTGATGGTGTGGTGAAAAAACGAAAAGTAGAGGAAGATTTATCAGTTGATGGAAATGTTGTTGCTGATTTTTCCTTAAATGATACCACGGAAACTAAGCTAGAAAAATCAAGTATTATACAGGATGACATGTTAATGGATTATCAGGGTGCAACTGCAGCTGCAGCAAATGCATCAGTTGCTGAACGTGTGATCGAGCCTACTCTTGTGATGTTTGAGGTTCATGTTCCCCCATCTTGTATGCTTGATGGTGTTCATTCACAGCACTTTTTTGGAACTGGTGTCATAATATATCACTCCCAAGATATGGGATTAGTTGCAGTTGACAAGAATACAGTTGCAATATCTGCCTCTGATGTAATGCTATCTTTCGCCGCCTTCCCAGTTGAAATTCCAGGAGAGGTGGTATTTCTCCATCCTGTTCACAATTATGCCCTCATATCATATGATCCCTCTGCATTGGGACCTGTTGGGGGTTCAGTTGTTCGTGCTGCAGAGTTACTTCCAGAGCCAGCATTACGCCGGGGTGATTCTGTTTATCTTGTGGGGTTGAGTAGAAGCCTTCAAGCAACTTCTAGGAAATCAGTTGTTACCAATCCTTGTGCTGCATTAAATATAGGATCTGCTGATTCCCCTCGCTACAGAGCAACCAATATGGAAGTAATTGAGCTTGATACAGATTTTGGCAGTACATTTTCGGGTGTGCTAACAGACGAACAAGGAAGGGTCCAAGCTATATGGGGAAGCTTCTCAACTCAGCTGAAATTTGGTTGCAGCACCTCAGAAGATCATCAATTTGTGAGGGGTATTCCAATTTATGCAATAAGTCAGGTCCTTGACAAGATTGTATCTGGTGCAAAAGGGCCACCTCTTCTCATAAATGGTGTCAAAAGGCCTATGCCACTTGTGAGAATTTTAGAGGTGGAACTTTATCCAACATTGCTTTCAAAGGCTCGGAGTTTTGGATTAAGTGATGATTGGATTCAGGCACTTGTTAAGAAAGATTCAGTAAGACGTCAGGTTTTACGTGTTAAAGGTTGTTTGGCTGGATCGAAGGCTGAGAATCTTTTAGAACAAGGGGACATGGTTTTAGCAATCAATAAAGAACCAGTCACATGCTTCCATGACATTGAAAATGCTTGCCAAGCTTTAGACAAATCTAATGCCAATGATGGGAAGCTTCACTTGACTATTTTCCGGCAGGGACAAGAGGTTGAACTTATTGTGGGAACAGATGTTAGGGATGGAAATGGCACTGCTCGTGCAATTAATTGGTGTGGCTGTATTGTTCAAGATCCACATCCAGCAGTACGTGCTCTTGGATTTCTTCCCGAAGAAGGTCATGGTGTATATGTGGCAAGGTGGTGTCATGGGAGTCCAGTACATAGATATGGTCTATATGCTCTTCAGTGGATAGTTGAAATTAATGGAAAACCAACTCCAAATCTAGATTCTTTCGTTAATGTGACAAAGGAACTAGAACACGGGGAGTTTGTTCGTGTAAGGACAATTCACCTCAATGGGAAGCCACGAGTCCTAACATTGAAGCAAGATTTGCACTACTGGCCTACGTGGGAATTGAGATTTGATCCTAATACTGCGATGTGGCATCGCAATATAATCAAGGGATTGAATGCAGTACTGTATGAATGA 3345 0.4481 MGDPAESLGSEGLDSGAAVKTDDLCMEIDPPFQENVATAEDWRKALNRVVPAVVVLRTTATRSFDTESAAASYATGFIVDKRRGIILTNRHVVKPGPVVAEAMFLNREEVPVHPIYRDPVHDFGFFRYDPGAIQFLNYEEIPLAPEAASVGLEIRVVGNDSGEKVSILAGTLARLDRDAPHYKKDGYNDFNTFYMQAASGTKGGSSGSPVIDWQGRAVALNAGSKSSSASAFFLPLERVVRALRFLQKGSETYVDKWKAVSIPRGTLQVTFLHKGFDETRRLGLKSETEQIVRHASPAGETGMLVVDSVVPGGPGYKHLEPGDVLVRVNGEVITQFLKLETLLDDSVNKNIELQIERGGTSKSLTLLVQDLHSITPDYFLEVSGAVIHPLSYQQARNFRFHCGLVYVAEPGYMLFRAGVPRHAIIKKFAGEEISCLDELISVLSKLSRGARVPLEYISYMDRHRRKSVLVTVDRHEWYAPPQIYTRDDSTGLWIAKPAFHFDSPFLSSGAKDVENLSRQPVSLTGEHACGGHVCGDNSQELVDGVTSMETNYEDPSECVSNHNASDGVVKKRKVEEDLSVDGNVVADFSLNDTTETKLEKSSIIQDDMLMDYQGATAAAANASVAERVIEPTLVMFEVHVPPSCMLDGVHSQHFFGTGVIIYHSQDMGLVAVDKNTVAISASDVMLSFAAFPVEIPGEVVFLHPVHNYALISYDPSALGPVGGSVVRAAELLPEPALRRGDSVYLVGLSRSLQATSRKSVVTNPCAALNIGSADSPRYRATNMEVIELDTDFGSTFSGVLTDEQGRVQAIWGSFSTQLKFGCSTSEDHQFVRGIPIYAISQVLDKIVSGAKGPPLLINGVKRPMPLVRILEVELYPTLLSKARSFGLSDDWIQALVKKDSVRRQVLRVKGCLAGSKAENLLEQGDMVLAINKEPVTCFHDIENACQALDKSNANDGKLHLTIFRQGQEVELIVGTDVRDGNGTARAINWCGCIVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKPTPNLDSFVNVTKELEHGEFVRVRTIHLNGKPRVLTLKQDLHYWPTWELRFDPNTAMWHRNIIKGLNAVLYE 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00135 1114 Gene3D - 279 372 IPR036034 GO:0005515
Pumo1g00135 1114 ProSiteProfiles PDZ domain profile. 269 333 IPR001478 GO:0005515
Pumo1g00135 1114 SUPERFAMILY PDZ domain-like 907 1009 IPR036034 GO:0005515
Pumo1g00135 1114 PRINTS HtrA/DegQ protease family signature 150 174 IPR001940 GO:0004252|GO:0006508
Pumo1g00135 1114 PRINTS HtrA/DegQ protease family signature 213 230 IPR001940 GO:0004252|GO:0006508
Pumo1g00135 1114 PRINTS HtrA/DegQ protease family signature 84 96 IPR001940 GO:0004252|GO:0006508
Pumo1g00135 1114 PRINTS HtrA/DegQ protease family signature 191 208 IPR001940 GO:0004252|GO:0006508
Pumo1g00135 1114 PRINTS HtrA/DegQ protease family signature 318 330 IPR001940 GO:0004252|GO:0006508
Pumo1g00135 1114 SUPERFAMILY Trypsin-like serine proteases 632 846 IPR009003 -
Pumo1g00135 1114 Gene3D - 145 256 IPR043504 -
Pumo1g00135 1114 SUPERFAMILY PDZ domain-like 304 403 IPR036034 GO:0005515
Pumo1g00135 1114 CDD PDZ_metalloprotease 305 366 - -
Pumo1g00135 1114 Pfam Peptidase family M50 260 374 IPR008915 GO:0006508
Pumo1g00135 1114 Pfam PDZ-like domain 984 1059 IPR025926 -
Pumo1g00135 1114 Pfam PDZ-like domain 373 446 IPR025926 -
Pumo1g00135 1114 Gene3D - 905 979 IPR036034 GO:0005515
Pumo1g00135 1114 SUPERFAMILY Trypsin-like serine proteases 40 244 IPR009003 -
Pumo1g00135 1114 Gene3D - 29 139 IPR043504 -
Pumo1g00135 1114 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 19 1109 - -
Pumo1g00135 1114 Pfam PDZ domain 305 357 IPR041489 -
Pumo1g00135 1114 Pfam Trypsin-like peptidase domain 74 220 - -
Pumo1g00135 1114 Gene3D - 643 850 - -
Pumo1g00135 1114 SMART pdz_new 1002 1071 IPR001478 GO:0005515
Pumo1g00135 1114 SMART pdz_new 881 966 IPR001478 GO:0005515
Pumo1g00135 1114 SMART pdz_new 280 359 IPR001478 GO:0005515
Pumo1g00135 1114 SUPERFAMILY PDZ domain-like 1011 1095 IPR036034 GO:0005515
Pumo1g00135 1114 Gene3D - 986 1084 IPR036034 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00135 K22686 - gmx:100809144 2150.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00135 1 2346245 2366937 Pumo1g00135 1 2346245 2366937 ECH