Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00120 ATGTCTGCCTCATGTGGGGTGGTGGAGTGCGTGTTCGTGCTGGGGTGCGCGCGGTGGCTGTGGAAGCGCTGCACCTACGTGGGCAGCTACGACAGCGCCACGTGGCCGGCCGCCACGGCGGACGAGTTCGAGAGGGTGCCACGCGTCTGCCGCCTGATCCTGGCCAACTACGAGCCCGATCTCCGGAACCCGAAGTACCACAAGCCCGCCACCGGGTACCGCCTGAACCCGGAGCACGTCATAAAGCGCGTCACGTACGAGGACACGCTCGGGCACGCGCCGCCCTACCTGATCTACCTGGACCACGAGCACAGGGAGATCGTGCTGGCGGTGCGTGGCCTGAACCTGGCGAAGGAGAGTGACTACAAAGTTCTGCTGAATAACCGTTTGGGGCAGCAGATGTTTGACGGCGGGTACGTGCACCACGGGCTGCTGAAATCGGCGGTGTGGCTGCTGAACCGTGCGTCGGAGACGCTGAAGCGGTTGTGGGTGGAGAATGGTTCGGAGTATGATATGGTTTTCGCGGGGCACTCGCTGGGTTCAGGGGTGGTGTCGCTGTTGACGATATTGGTTGTGAATCATAGGGAGCGGTTGGGAGGGATTCCGAAAGAGAAGATTCGGTGTTATGCGATTGCTCCTGCTAGGTGTATGTCTCTCAATTTGGCCGTCAAGTATGCCAATGTCATTCATTCTATTGTTTTGCAGGATGATTTCTTGCCAAGAACGCCTACTCCATTGGAAGATATATTCAAATCAATATTCTGCTTGCCCTGCCTATTATTCTTGGTTTGCCTAAGAGACACCTTCATTCCTGAGGGTAGAAAGCTTAGAGATCCAAGGAGACTTTATGCACCTGGACGAATGTACCATATTGTGGAGAGAAAGTTTTGCAGATGTGGGAGATTTCCTCCTGAAGTGAGGACTGCTATTCCTGTTGATGGAAGATTTGAGCATATTGTCTTGTCCTGTAATGCTACATCGGATCATGGAATTATTTGGATTGAAAGGGAGGCTGAGAAAGCCTTACAATTAATGAAGGCTCAGAGCTCTGAAACTGTGACAGACCCCCCAACCGTACAAAAGTTTGAGAGGTTGAAGACCATAGAGAAAGAACATAGAGATGCATTGGAAAGAGCTGTTAGCTTAAATGTACCTCATGCAGTGGACACTGCAGAGAAAGAACCCTCTGAAGGTGAAGAAACATCCGGTAGTGGAAACAATAATAACGTCTCAAGTACCGAATCAAAATCTAGTGGTGGAAAGTCAAACTGGGATGAGGTAGTTGAAAAACTCCTAAAGAAGAAAACTGAGACGGGAGAACCAAACCTGGAAAGGCATACAAATGTCGCACAATAA 1356 0.5125 MSASCGVVECVFVLGCARWLWKRCTYVGSYDSATWPAATADEFERVPRVCRLILANYEPDLRNPKYHKPATGYRLNPEHVIKRVTYEDTLGHAPPYLIYLDHEHREIVLAVRGLNLAKESDYKVLLNNRLGQQMFDGGYVHHGLLKSAVWLLNRASETLKRLWVENGSEYDMVFAGHSLGSGVVSLLTILVVNHRERLGGIPKEKIRCYAIAPARCMSLNLAVKYANVIHSIVLQDDFLPRTPTPLEDIFKSIFCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNATSDHGIIWIEREAEKALQLMKAQSSETVTDPPTVQKFERLKTIEKEHRDALERAVSLNVPHAVDTAEKEPSEGEETSGSGNNNNVSSTESKSSGGKSNWDEVVEKLLKKKTETGEPNLERHTNVAQ 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00120 451 SUPERFAMILY alpha/beta-Hydrolases 38 246 IPR029058 -
Pumo1g00120 451 CDD Lipase_3 42 244 - -
Pumo1g00120 451 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 440 - -
Pumo1g00120 451 MobiDBLite consensus disorder prediction 400 422 - -
Pumo1g00120 451 Pfam Lipase 3 N-terminal region 8 73 IPR005592 GO:0016042
Pumo1g00120 451 MobiDBLite consensus disorder prediction 377 451 - -
Pumo1g00120 451 Gene3D alpha/beta hydrolase 34 258 IPR029058 -
Pumo1g00120 451 MobiDBLite consensus disorder prediction 426 442 - -
Pumo1g00120 451 Pfam Lipase (class 3) 108 244 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00120 Pumo-Chr1 2103299 2107698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00120 1 344 Miscellaneous Gene Families AT5G37710 75.872 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00120 - - gmx:100798831 807.364