Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00116 ATGGTGGCTGTGGTTTCCCAAGAAAATGTTGTGGCATTGGTTTCTCGTACTGGTAGGGAGTTGCAACGTTATAGAAAAGGTCGTCGCCAAGTTGTGGGATGCATACCATACAGATTTAAGATTGGGGAGAGAACTTCCATGGACGTTTCTGATGAATTGGAAGTTCTGGTTATTAGTTCGCAGAAAGGAAAAGGGATGCTATTCCCAAAGGGAGGCTGGGAATTAGACGAATCAAAAAAGGAGGCAGCTTTGAGAGAAACCATAGAAGAAGCTGGGGTGCGAGGCATTGTTGGGGGTAAATTGGGTAAATGGAGTTTCAAGAGCAAGACTCATGACACTTTCTATGAAGGCTACATGTTCCCTTTACTTGTTCAAGAGCAATTGGAGTTGTGGCCAGAGCAAAACGTTCGTCAAAGAATATGGATGAGCGTCACTGAAGCAAGGGAAGTTTGTCAACACTGGTGGATGAAGGAAGCTCTAGACAGACTTGTAAATCGTCTCTCGGGTCAAAAGCTTGGTCGTGATAATAAGCAAGTTCTTGGTTCTATAAACTGCAAAGAGATGCCAAATCTGACTTGTAAAATAGTGTAG 591 0.4349 MVAVVSQENVVALVSRTGRELQRYRKGRRQVVGCIPYRFKIGERTSMDVSDELEVLVISSQKGKGMLFPKGGWELDESKKEAALRETIEEAGVRGIVGGKLGKWSFKSKTHDTFYEGYMFPLLVQEQLELWPEQNVRQRIWMSVTEAREVCQHWWMKEALDRLVNRLSGQKLGRDNKQVLGSINCKEMPNLTCKIV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00116 196 FunFam Nudix hydrolase 17, mitochondrial 14 166 - -
Pumo1g00116 196 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Pumo1g00116 196 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Pumo1g00116 196 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 166 - -
Pumo1g00116 196 SUPERFAMILY Nudix 21 167 IPR015797 -
Pumo1g00116 196 Pfam NUDIX domain 54 161 IPR000086 -
Pumo1g00116 196 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 14 168 - -
Pumo1g00116 196 CDD Nudix_Hydrolase_9 30 157 IPR047198 GO:0016462
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00116 Pumo-Chr1 2000129 2002087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00116 K07766 - gmx:100795999 357.836