Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00107 ATGTGCGGCATGGCCTCTCTATCCGACAATTTCAATTCCCCCTCTCCCTCTGCCCATGTCCACTTGTTGAACATCAACTCCTTTCAGAAACACCCCAACGCCAATGACGAGGTCATTCATTCCTCTTTCTGCTATTTCTCATCTACCTTTTACCATATTATATGTTTGATTCCTCAAATTTCTCATCACATGCTCTCAGATAATATTCAAATCTCATCTTTATTCATTAGTCTATTCTTGCAGGTCAGTATGACATTGAATATATCAGCAGATTTGCAGTCCCTTTTCACATGGAACACAAAACAGGTTTTTGTTTTTCTAGCTGCTGAGTATGAAACTCCTAAGAATTCCTTCAATCAGATATCTCTATGGGATGGTATCATTCCCTCCAAAGAGCATGCCAAGTTTTGGATTCATACATCAAACAAGTACCGCTTCATTGACCAGGTATACAACTCTCAAAGGTTGTTTTATGACTAA 480 0.3896 MCGMASLSDNFNSPSPSAHVHLLNINSFQKHPNANDEVIHSSFCYFSSTFYHIICLIPQISHHMLSDNIQISSLFISLFLQVSMTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSFNQISLWDGIIPSKEHAKFWIHTSNKYRFIDQVYNSQRLFYD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00107 159 PANTHER MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 1 149 IPR007653 GO:0005787|GO:0006465|GO:0016020
Pumo1g00107 159 Pfam Signal peptidase subunit 81 149 IPR007653 GO:0005787|GO:0006465|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00107 Pumo-Chr1 1873823 1875134 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00107 K12948 - gmx:100306631 179.489