Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02329 ATGGCATCCAATAACCCATATGAGATCATGGACGATGAGGGATTTGACTGGGAAGCAGCTGCTAGAGAAATCGACGTGGTTTGCCAGATGACCGGTGACGCAAAGGGAAAGGGAAAGGTTTATGAGAAGAAAAAGCAGCAATCCACTCTCGATGAGTTCGTGTCTATTGCCAATACCAAAAAAGAAACCCCGACACCGCAGTTCCAAGAAGATGACCAAAACCCTACTTTAGTCCACCACATTGACGCTGAGGCGGCCAAAACCTGGATATATCCAGTTAATGTTCCTCTCCGTGACTATCAATTTGATATCACCCAGTCCGCACTCTTCTCAAACACATTGGTGGCCTTGCCAACGGGACTTGGCAAAACACTCATTGCCGCTGTTGTTATGTATAACTACTTCAGATGGTTCCCTCAAGGCAAAATAGTCTTTGCTGCTCCTTCTCGGCCACTTGTCATGCAGCAGATAGAAGCATGCCACAATATCGTGGGAATACCTCAAGAATGGACAGTTGATATGACTGGTCAGCTAAGTCCTCCCAAAAGAGCTCAATTTTGGAAAACAAAGCGAGTTTTCTTTGTCACTCCACAAGTGTTGGAAAAGGATATTCATTCTGGTACATGTTTGGTGAAGTACTTGGTATGTCTGGTGATTGATGAAGCTCACAGAGCAATGGGAAATTACGCTTATTGTGAAGCAGTTCGTGAGTTAATGGCTGTACCGGTACAGCTGAGAATATTAGCGTTAACTGCAACGCCAGGATCAAAGCAACAGACAGTCCAGTCTGTCATTGATAATCTGCATATCTCCAGACTTGAATATCGCAGTGAAACTGACCATGATGTTATCTCATATGTTCACAATAGGAAGATAGAATTGATACAGGTTGCAATGGGCCCAGAAGCTGTAGAAATAAACAATAAGTTTATGGAAGTAATACGCCCTATAGTAGCCCGGCTTACAAATATTGGGGTCATTCAGAACAGAGATTACCGCACTTTGAGCCCTTGTCAATTACTTGAAATAAGGGAAAAGTTTCGTCAGCGGCCTATGCAAGATCTTTCTCATGTCAACTATGAAGATGTTGAAGGGTATTTTGGAGTTCTCATTACTCTTTATTACATCCATAAGTTACTCTCAAGTCACGGAATAAGGCCAGCATATGAGATGCTTGAGAGAAAATTGAAGCAAGGATATTTTGCAAAATTTATGAGTAAAAATGAAGTTATTCTGAAAGCAAGGCAACTAATGCAGCAATGTTTGTCTCACGGAGCATCTAGTCCAAAACTGTCCAAAATGCTAGAAGTATTACTGGAGCATTTCAAAACAAATGATCCGCAAAACTCCAGGGTAATTATCTTCTCGAATTACAGAGAAAGTGTAACGGATATAATGAATGCACTTGGAGATATTGAGGAATTAGTCAGAGCTACCGAGTTTATTGGTCAAAGTTCAGGGAAAGCAATGAAAGGTCAGTCCCAAAAAGTTCAACAGGCTGTGCTGAAGGTATGTATTCTGTTTGGTATAAGATTCATACTCCTTCCATGTACTTACATGGTTCATCAACAGAAATTTCGGTCTGGTGCCTATAATGTCATTGTTGCTACATCAATTGGTGAAGAAGGTCTTGATATCATGGAAGTTGATCTTGTCATATCTTTTGATGCTAATATTTCACCACTTAGAATGATTCAGCGAATGGGGAGAACCGGAAGAAAGCATGATGGACGAATTCCTCATGTCCATAAACCAGAAGTTCAATATGTTGAGCTGTCCATTGAGAAATTTATTCCTCGTCAAAAGAATGTGAAAGACGATGAGCTCCACATTTCTCTATCAAAGGACAAACTCACTGTTGCTGAAATTGATTTACTTGAAACATATTTTCATCCTACTGGGGAAAACAATTGTAGAATGTCTCTTATTGCCTTTCCCCACTTTCAGACCTTTCCTTCTAGAGTGCATAAAGTGAAGCATTCCTCTGGAACGTTGATGCTTATAGACATGATGCAGCGTTTGCAAGGACTAGTATCATTTCCAGAAGATGACAAAACTTCTTCACTACAGGAAGATCTGTGTTTGGGACATAGTAAGCCAGTCACCACTACCAAACTTGATGAAGCTAAAAGGGACAATGAATCATGCTCTAGGCGTACAATGAGAAGGAATGTAGTCTCTGTTAATTGTCTGGAGCTGGATTCGTGTCATTTGGGGATTCAAAGCAAAGACTTTGTTGATCTAACTCTACAAGATGGTACTTTCTGTGACTTGGGTAAGAATCAAGAGGAAACATGTGAGGGTGATGAGACAATTCCCGAAACTCCAATTGCTAAGAGAAGTGTGTCAAATGAAGGAGATAATGCTGGTGAAATGGTAAATCTTGTGGAGATTGAGACTTTTTCGTTGGTTGTGGATGCATGCATTAATGGCACGAGAGATGAAGAACTTAGTCCACGTTTAAGTAATTTGATTAGAAGTGGTGTTGTTCCAGAGTCTCCCGTTGATGACAGAGGTGGCTGTCTTCGAGGGAAATCAAGATACAATTCTGTCATACACGACTGTATGTTACCTGTTCATCTCCACAAAGAACAGGATATTAGTTCTATAAGCTCTAGGGACACTAAAGAGGTCATCATTGATAGGGGCACTGATAATAATATCTGTACTTCCCCCATTAATGAAACTCAAAGCCCTTTACTTGACCTGAAGAATTGTGCAATTAGAAGAGGACGAGTCTTCCTTTCTCAAACTGAGGAAGGCCATACACATAACACTGACCCAATTTTCAGTGAAGAAGCACTTCTAGCAGATTGTGGTGAAATGTCTGAAAGCATTAAACCTGCACACAAATTTAAAAGGTTGCGGAAAGCTGAAGACACTAAAAGTAATATGAATCAGAAAAACAATAAACTTTTTGCTTCAACAGCAAACTTTCTCAAATCATCTTCTGCCTCCAATCCTGCACAATATAAGCATGGCCAAGGTAAAAGGAAATCAACACACAATGTGGGAGACTTCATTGAGGAGGAAGCTGAGGTATCTTCAGATGCCTATGTATCTAATGATGAAGATGACGAGGATGGCAATTCATTTGACAGTTTCATAGATGACAGGACCAACCCTACAGCAGCCAGTCAGCCTGAAGCTAGTAGAATGGACATGATGGCAATTTACAGGCGTTCTTTGCTCAGTCAAACACCAAGTAATGGAGGGCTTGATTTTTCTACCACTTTTACTCCTGACCGTGTGACTATGGCAGCCAGTATTAGTGAAAGTGGGGATTCTTCAGGGAAGACAGTGAATCATTTCCACACAGAGCCAACCAAACAGTCAGCAAATCGGACTTTGGAATCTGTTAGTATCGACCAGATAACCTCAGAAGCAGTGCCTTCAACTTGTTCTCCTACGGGAACTGGGACAGAGACAAGAAGTCGCAAACGAAGATTGGCATTTTACCATTCTGGACACTTTCCAAATATGAACCTTGAACGAGAATTTGCACTTCAATCAAAGAAAGAAGTAGTGGATGCGGATGCAACTACAGATGTTCTATGTGATGATCAATTTTATAATGACCTTGATCTTGACGAGTTGGAGGCGCAAGCAACTTTGCTTCTAAAACAGAAATTAGATTTGTCAATTCAGAAGCAAGATACGGTCCCTCAATCTCACACATCCAATCTTGATATTTTTCAGTCTCCATCATTTGACCTTGGGATATGA 3726 0.4082 MASNNPYEIMDDEGFDWEAAAREIDVVCQMTGDAKGKGKVYEKKKQQSTLDEFVSIANTKKETPTPQFQEDDQNPTLVHHIDAEAAKTWIYPVNVPLRDYQFDITQSALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEACHNIVGIPQEWTVDMTGQLSPPKRAQFWKTKRVFFVTPQVLEKDIHSGTCLVKYLVCLVIDEAHRAMGNYAYCEAVRELMAVPVQLRILALTATPGSKQQTVQSVIDNLHISRLEYRSETDHDVISYVHNRKIELIQVAMGPEAVEINNKFMEVIRPIVARLTNIGVIQNRDYRTLSPCQLLEIREKFRQRPMQDLSHVNYEDVEGYFGVLITLYYIHKLLSSHGIRPAYEMLERKLKQGYFAKFMSKNEVILKARQLMQQCLSHGASSPKLSKMLEVLLEHFKTNDPQNSRVIIFSNYRESVTDIMNALGDIEELVRATEFIGQSSGKAMKGQSQKVQQAVLKVCILFGIRFILLPCTYMVHQQKFRSGAYNVIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHDGRIPHVHKPEVQYVELSIEKFIPRQKNVKDDELHISLSKDKLTVAEIDLLETYFHPTGENNCRMSLIAFPHFQTFPSRVHKVKHSSGTLMLIDMMQRLQGLVSFPEDDKTSSLQEDLCLGHSKPVTTTKLDEAKRDNESCSRRTMRRNVVSVNCLELDSCHLGIQSKDFVDLTLQDGTFCDLGKNQEETCEGDETIPETPIAKRSVSNEGDNAGEMVNLVEIETFSLVVDACINGTRDEELSPRLSNLIRSGVVPESPVDDRGGCLRGKSRYNSVIHDCMLPVHLHKEQDISSISSRDTKEVIIDRGTDNNICTSPINETQSPLLDLKNCAIRRGRVFLSQTEEGHTHNTDPIFSEEALLADCGEMSESIKPAHKFKRLRKAEDTKSNMNQKNNKLFASTANFLKSSSASNPAQYKHGQGKRKSTHNVGDFIEEEAEVSSDAYVSNDEDDEDGNSFDSFIDDRTNPTAASQPEASRMDMMAIYRRSLLSQTPSNGGLDFSTTFTPDRVTMAASISESGDSSGKTVNHFHTEPTKQSANRTLESVSIDQITSEAVPSTCSPTGTGTETRSRKRRLAFYHSGHFPNMNLEREFALQSKKEVVDADATTDVLCDDQFYNDLDLDELEAQATLLLKQKLDLSIQKQDTVPQSHTSNLDIFQSPSFDLGI 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02329 1241 Pfam Type III restriction enzyme, res subunit 110 254 IPR006935 GO:0003677|GO:0005524|GO:0016787
Pumo11g02329 1241 Gene3D - 423 597 IPR027417 -
Pumo11g02329 1241 MobiDBLite consensus disorder prediction 950 969 - -
Pumo11g02329 1241 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 430 626 IPR001650 -
Pumo11g02329 1241 MobiDBLite consensus disorder prediction 950 964 - -
Pumo11g02329 1241 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 8 503 - -
Pumo11g02329 1241 SMART ultradead3 93 293 IPR014001 -
Pumo11g02329 1241 Pfam Helicase conserved C-terminal domain 437 574 IPR001650 -
Pumo11g02329 1241 Gene3D - 93 287 IPR027417 -
Pumo11g02329 1241 CDD SF2_C_FANCM_Hef 428 579 - -
Pumo11g02329 1241 MobiDBLite consensus disorder prediction 1013 1049 - -
Pumo11g02329 1241 CDD FANCM_ID 304 418 IPR039686 GO:0006281|GO:0043138
Pumo11g02329 1241 Gene3D hef helicase domain 301 422 - -
Pumo11g02329 1241 MobiDBLite consensus disorder prediction 1013 1032 - -
Pumo11g02329 1241 SMART helicmild6 499 575 IPR001650 -
Pumo11g02329 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 579 IPR027417 -
Pumo11g02329 1241 MobiDBLite consensus disorder prediction 984 1003 - -
Pumo11g02329 1241 FunFam Fanconi anemia, complementation group M 92 287 - -
Pumo11g02329 1241 CDD DEXDc_FANCM 95 276 IPR044749 GO:0005524
Pumo11g02329 1241 Coils Coil 1196 1216 - -
Pumo11g02329 1241 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 104 272 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02329 Pumo-Chr11 56012609 56027540 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02329 K10896 - gmx:100820078 1880.92