Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02323 ATGATGAGTGAGAGCAACGGGAACAGCAGGAGGCGAAATGTTGAAGATCAAGATCTGGGATTGTACTTCTTGGAGGCGTGCAGGGGTAGGGAGATGAAAGAGGAAGAGGAAGAGGAGGAGGCGCCCAGGGAGCTCAACACCATTAACAGCTCTGGTGGTTTCGTGGTGGTGTTCACAGACAAGTTGTCGGTAAAGTACACCGGCGTCAACCTTCACGGCCACGACGTCGGTGTCATTCAGGCCAACAAGCCTGCTCCTACCAAGCGCCTCATTTACTATTTCGAGATTCTTGTCAAGAATGCCGGCGTTAAGGGCCAGATAGCCATTGGCTTCACCTCCGAGACTTTCAAGATGCGAAGACAACCAGGGTGGGAGGCCAATAGCTGCGGCTATCACGGCGATGATGGTCTGCTCTACCGTGGACATGGCAAAGGAGAAGCGTTTGGCCCAACCTATACATCTGGAGATGTAGTTGGTGCTGGAATTAACTATGCTGCACACGAATTCTTTTTCACTAAAAATGGCCAAGTTGTCGGCTCTGTTTACAAAGACATGAAAGGCCCCCTTTTTCCAACCATTGCTGTTCACAGCCAAAACGAAGAGGTGCATGTCAACTTTGGGCAGAAACCATTTACTTTTGACCTAAAGGAATTTGAAGCACAAGAAAGAATGAAGCAGCAACTGAAAATAGAGGAAATTTCTGTGCCACCAAATGTCAGTTACGGAATTGTCCGCTCCTACCTGCTACACTATGGCTATGAAGATACATTGAATTCATTTGATGTGGCTAGTAAAAGTACTGTTCCTCCTATATACATAGCTCAAGAAAGTGGAATTGATGAGCAGGAAATAACATACGCGTTAAATCACAGAAAGACTCTACGGCAGCTAATCAGGAATGGGGACATTGATGTTGCATTTGGTAAATTGCGTGAATGGTATCCACAGATTGTTGAGGACAATACATCAGCTACATGTTTTCTGCTTCATTGTCAAAAATTTATTGAATTAGTTCGGGTTGGAGCACTTGAAGAGGCTGTCAAATATGGAAGAATAGAATTGTCAAGTTTTTACGACTTGCCTGTCTTTAAGGATTTAGTTCAGGACTGTGTTGCTTTGCTGGCATATGAACAGCCTCTGGAATCCTCCGTAGGTTATCTTCTAAAAGACTCGCAGCGTGAAGTTGTAGCTGACACAGTAAATGCCATGATATTGTCCACAAATCCTAATATGAAAGATTCAAAACATTGTTTGCACTCCTATCTTGAGAGGTTACTTAGACAGCTCACTGCTTGCTGCTTAGAGAGGCGATCACTGAATGGAGAGCAGGGAGAAGCTTTCCAACTTCAGAGAGTGCTTAGCAGTAGTAGAAGAGGCTAG 1380 0.4493 MMSESNGNSRRRNVEDQDLGLYFLEACRGREMKEEEEEEEAPRELNTINSSGGFVVVFTDKLSVKYTGVNLHGHDVGVIQANKPAPTKRLIYYFEILVKNAGVKGQIAIGFTSETFKMRRQPGWEANSCGYHGDDGLLYRGHGKGEAFGPTYTSGDVVGAGINYAAHEFFFTKNGQVVGSVYKDMKGPLFPTIAVHSQNEEVHVNFGQKPFTFDLKEFEAQERMKQQLKIEEISVPPNVSYGIVRSYLLHYGYEDTLNSFDVASKSTVPPIYIAQESGIDEQEITYALNHRKTLRQLIRNGDIDVAFGKLREWYPQIVEDNTSATCFLLHCQKFIELVRVGALEEAVKYGRIELSSFYDLPVFKDLVQDCVALLAYEQPLESSVGYLLKDSQREVVADTVNAMILSTNPNMKDSKHCLHSYLERLLRQLTACCLERRSLNGEQGEAFQLQRVLSSSRRG 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02323 459 PANTHER RAN BINDING PROTEIN 9-RELATED 44 435 - -
Pumo11g02323 459 CDD SPRY_RanBP_like 77 207 IPR044736 -
Pumo11g02323 459 SUPERFAMILY Concanavalin A-like lectins/glucanases 49 213 IPR013320 -
Pumo11g02323 459 Gene3D - 25 227 IPR043136 -
Pumo11g02323 459 SMART ctlh 287 345 IPR006595 -
Pumo11g02323 459 ProSiteProfiles B30.2/SPRY domain profile. 22 211 IPR001870 -
Pumo11g02323 459 SMART SPRY_3 89 210 IPR003877 GO:0005515
Pumo11g02323 459 SMART toby_final6 341 442 IPR013144 -
Pumo11g02323 459 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 287 345 IPR006595 -
Pumo11g02323 459 Pfam SPRY domain 91 208 IPR003877 GO:0005515
Pumo11g02323 459 FunFam Ran-binding protein M homolog 24 221 - -
Pumo11g02323 459 Pfam CTLH/CRA C-terminal to LisH motif domain 289 431 IPR024964 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02323 K23334 - gmx:100805319 865.144