Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02322 ATGGCGAAATCGGGGAATAAGAATATGGGATCAACCTCTGCGTCCGCAAAAGTTCATCCTTCCAATGATCCCGAACTCGATCCCAACGCTTACGCCCTCGAGAAGTTCAGACTCTACGAAACCAGAGCGAGGTTTTACCTGATCGGAAGTGATCGGAACAAGAGGTTCTTCCGGGTGTTGAAAATCGATCGATCAGAGCCGTCGGATCTGAATATCAGCCAAGACCCCGTGCTGTATTCGCCCGAGGAAATCAAGAGCTTGCTTCAGCGGATTGCTGAAGGTAACAGGGCCACTGGCGGCCTCACTTTCGTCGCTAAGGTTTTCGGGATTGCCGGCTGCATCAAGTTTCTCGAGTCCTACTATTTGATTCTCGTTACTAAGCGCAGACAAATTGGTTCTATTTGTGGCCATGCAATCTACAGCATCAAAGAGAGCCAATTGATAACCATTCCACATGTTTCAATTCAATCTGATTTAGCTCATTCTAAGACTGAGCTCAGGTACAAAAAGCTTTTGTCCAGTGTCGATTTGACCAAGGATTTTTTCTTTTGTTACACTTACCCTATAATGCAAAGTTTGCAAAAGAACGTCTCATCCAGTCAAGAGGGAGGGATGTCATATGATAATATTTTTGTTTGGAATGCCTATTTGACGCAAGCAATCAGATCAAGATGCAATAACACCATTTGGACCATAGCTTTAGTTCATGGTCATTTTAGGCAGATTCGTCTATCAATTTTTGGGAGGGACTTCAGTGTTTCCTTGATTTCTAGACGATCAAGACATTTTGCAGGGACACGGTACTTGAAAAGGGGTGTGAATGATCGGGGGAGGGTTGCTAATGATGTTGAGACAGAGCAGATTGTCCTCGATGAAGAAGCTGGCTCTTGCAAGGGAAAAATGAGTTCAGTTGTGCAAATGCGTGGATCAATACCACTTTTCTGGTCACAAGAAGCATCAAGATTTAGCCCTAAGCCTGACATAATTTTGCAGAGGTATGATCCAACATACCAGGCAACAAAATTGCATTTTGAAGACCTAGCTAAGAGATATGGCAATCCAATTATTGTTCTTAATTTGATTAAGACAGTTGAGAAACGGCCTCGAGAAATGATGCTGAGGCATGAATTTGCAAATGCTGTTGGGTATCTGAACCAAATTCTACAAGTAGAGAACCATCTTAGATTTATTCACTGGGACTTTCACAAGTTTGCAAAGAGCAAGTCTGCCAATGTTTTGGCAGTTTTAGGAGCTGTAGCAAGTGAAGCGCTTGATTTAACTGGTTTTTACTACAGTGGTAAACCCAGTATCATAAAGAGGGCCAACAAGAGCAATCGAACAAGCACAGGGAGGGATACTTCACTGAGAGATCTGAGAGCTAGTTCTGGGGATCTTGTGAGGATTGGGAACAGTAATGAAATGCTAAATTCTGTGGTTAATCGAGACAAAGAGACTGACATGAACCATCAGAATAAAAAAGATAATTTTAGTTGTGATGCACCGCATTTTCAGAGTGGAGTTCTCCGTACCAACTGCATTGACTGCTTGGACCGTACAAATGTTGCCCAGTATGCATATGGTCTTCAAGCTTTAGGACGCCAGCTCCATGCAATGGGTTTGACTGATGTGCCAAAAGTGGATCCTGATAGTAGTATTGCTGCAGCTCTAATGGAAATGTATCAAAGTATGGGAGATGCTCTTGCCCAGCAGTATGGTGGCTCTGCAGCTCACAATACTGTGTTTCCAGAGAGGCAGGGAAAGTGGAAAGCAACTACACAATCAAGAGAGTTTTTAAAATCCATAAAACGATACTATAGCAATGCTTACACAGATGGTGAAAAACAAGATGCAATAAACTTGTTTTTAGGTTACTTCCAACCACAGGAAGGGAAACCTGCTCTCTGGGAGCTGGATTCAGATTATTATCTCCATGTATCTGGGATTGGGGATGATCTAATTCCTGAGAAGTGTTCTGAACCAAATCCCAATCCTTCTGGAAGAGATGGAATGGTATTCACCCCTATACCAGCTTGCAGAGAAGACTTCTATCGCATAAAGTTGACATCATTTGACAAATTAATTGAAAAGACCTGTAGTACAATTAAAAATGTAAGACTATGCTGTGAACCTGATCAGAGACCAGGTGGGGTTTCTGGAAACAGTGGTGTAGCACCTGATGCAGCTGAGATACAGCTCAAAAGCCCAAATTGGCTTTTCGGCCAGAGAAAGTATGAAGAGGGTTCCTCTGCTGCAAAAGTTGCTTCTCGTGAAACTGACGTTGAAGGATCTCATGCTAATGGCTTTTGTGACTTGAATTGGCTTTCCTCTGGCAATGATATGAATGAAGAGGATGTTTTCCAAAGGTACCTTACAATGACCTCAGCAAATGAGGCCAACGGTTGGTATGGAGGTAGTCTCCTCGGCGATCAAGATGAAAGCAGTGAGATATATAAACATTATGCTGAGTTATGTCAGGGACCTGCCTTGGAACTTTCCCAAAATGATCTTGAGAGGGAGCAACACTATGCAGATGCTTTAAGCACGAGTTCATATGAAATTGTTAATGATGCTGCTGTTGCAGCAGAAATGGAAGCAGCTTTAAAGGAGTATGACCAAGTTGGTGCTGACCTTGGGATCATTCCCAAATCTTGTAAATTCTTTGCAGATGATCCGAGCTGGCTGACGAGATGGTTAACTGGGGACGAAAAAGTACCAAGGATATGA 2724 0.4284 MAKSGNKNMGSTSASAKVHPSNDPELDPNAYALEKFRLYETRARFYLIGSDRNKRFFRVLKIDRSEPSDLNISQDPVLYSPEEIKSLLQRIAEGNRATGGLTFVAKVFGIAGCIKFLESYYLILVTKRRQIGSICGHAIYSIKESQLITIPHVSIQSDLAHSKTELRYKKLLSSVDLTKDFFFCYTYPIMQSLQKNVSSSQEGGMSYDNIFVWNAYLTQAIRSRCNNTIWTIALVHGHFRQIRLSIFGRDFSVSLISRRSRHFAGTRYLKRGVNDRGRVANDVETEQIVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRHEFANAVGYLNQILQVENHLRFIHWDFHKFAKSKSANVLAVLGAVASEALDLTGFYYSGKPSIIKRANKSNRTSTGRDTSLRDLRASSGDLVRIGNSNEMLNSVVNRDKETDMNHQNKKDNFSCDAPHFQSGVLRTNCIDCLDRTNVAQYAYGLQALGRQLHAMGLTDVPKVDPDSSIAAALMEMYQSMGDALAQQYGGSAAHNTVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPQEGKPALWELDSDYYLHVSGIGDDLIPEKCSEPNPNPSGRDGMVFTPIPACREDFYRIKLTSFDKLIEKTCSTIKNVRLCCEPDQRPGGVSGNSGVAPDAAEIQLKSPNWLFGQRKYEEGSSAAKVASRETDVEGSHANGFCDLNWLSSGNDMNEEDVFQRYLTMTSANEANGWYGGSLLGDQDESSEIYKHYAELCQGPALELSQNDLEREQHYADALSTSSYEIVNDAAVAAEMEAALKEYDQVGADLGIIPKSCKFFADDPSWLTRWLTGDEKVPRI 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02322 907 ProSiteProfiles Sac phosphatase domain profile. 172 573 IPR002013 GO:0016791
Pumo11g02322 907 MobiDBLite consensus disorder prediction 1 25 - -
Pumo11g02322 907 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 19 843 IPR043573 GO:0043813|GO:0046856
Pumo11g02322 907 MobiDBLite consensus disorder prediction 1 19 - -
Pumo11g02322 907 Pfam SacI homology domain 108 404 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02322 Pumo-Chr11 55921698 55935579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02322 1 907 Acyl Lipid Metabolism Gene Families AT1G22620 74.671 0.0 1436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02322 K22913 - gmx:100804786 1736.85