Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02283 ATGGTTCTTCTACAACTAGATCCGTTTCTCAATGAGCTCACCAGCATGTTTGAGCGCAGCACTGAGAAGGGCTCTGTTTGGGTTACTCTTAAACGATCATCTTTGAAATCTAAGGTGCAGAGGAATAAATTGAAGACTGCTGGTGAAGCAATTGAGTATAGATGCCTTATACGTGCCACTGATGGGAAAAAGACAATCTCTACTTCGGTTGGACCGAAGGATCACCAGCGCTTTCAAGCTTCTTATGCAACTATATTAAAGGCCCATATGACTGCTCTAAAGAAGAGAGAAAGGAAAGACAAGAAGAAGCCTGCAGAGGCAGATAAAACAGAAAGGAGTTCAAAGAGACCAAAGAAGTCTTAA 363 0.4215 MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKLKTAGEAIEYRCLIRATDGKKTISTSVGPKDHQRFQASYATILKAHMTALKKRERKDKKKPAEADKTERSSKRPKKS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02283 120 PANTHER SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN 1 112 IPR003210 GO:0005786|GO:0006614|GO:0008312|GO:0030942
Pumo11g02283 120 MobiDBLite consensus disorder prediction 99 114 - -
Pumo11g02283 120 Gene3D Signal recognition particle alu RNA binding heterodimer, srp9/1 1 120 IPR009018 GO:0006614|GO:0008312|GO:0048500
Pumo11g02283 120 Pfam Signal recognition particle 14kD protein 4 93 IPR003210 GO:0005786|GO:0006614|GO:0008312|GO:0030942
Pumo11g02283 120 SUPERFAMILY Signal recognition particle alu RNA binding heterodimer, SRP9/14 1 96 IPR009018 GO:0006614|GO:0008312|GO:0048500
Pumo11g02283 120 MobiDBLite consensus disorder prediction 93 120 - -
Pumo11g02283 120 FunFam Signal recognition particle 14 kDa protein 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02283 Pumo-Chr11 55410636 55413240 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02283 K03104 - gmx:100526909 210.69