Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02270 ATGATCCCTGCTGATCTTGAGCATGCTCCACAAATTCCCTTGTTAAATCCTCCAAGTTCCCTAGCAAGGGAAAATGGTGGAAGGAGACTGCAAAAGGGTACCCTTGTTTTCGTTGTCTCGATCGTTTTCCTAATGTCATTGTTTGCACTTATCATAAACCTTCAGAGGCGCCATGAGCCATTGGAAAACAATAATATTGCAGTGTCCGTGCCATTAGTGCCTAGAGGGGTTGCTGAGGGTGTTTCAGCCAAGTCAAATCCATATCTGTCACAGAAAGCTTCATATAATTGGACAAATGCCATGTTATCTTGGCAGAGAACAGCTTTCCATTTTCAACCTCAAAGGAACTGGATGAACGGTCCATTGTTTTACAAGGGGTGGTACCATATATTTTACCAATACAATCCCGATTCAGCTGTGTGGGGCAACATAACATGGGGCCACGCTGTATCGAGGGACTTGATTCACTGGCTCTACCTTCCCATTGCGTTGGTTCCAGATAGCTGGTTTGACATCAACGGTGTATGGTCAGGCTCAGCCACCCTTTTGCCAAATGGCAAAATCGTAATGCTCTACACCGGTAATACTGATCAAAACGTGCAAGTCCAAAATCTTGCATACCCCGCCAACCTATCTGATCCGCTCCTCCATGATTGGGTCAAATGCGCTAATAACCCTGTCTTGGTGCCTCCACCTGGCATTGGTTCAAAGGATTTTCGTGACCCAACCACTGCGTGGATTGGCCCAGATGAGAAGTGGAGGGTCACTATTGGGTCAAAGGTCAACAAGACAGGCCTTTCATTGGTTTACAAAACCAAAGATTTCATTCACTATGAGCGAAATGATCACTATTTGCATACAGTCCCGGGTACGGGTATGTGGGAGTGCGTGGACTTTTACCCGGTTTCAGTAAACGGGCCTAGCGGTTTGGATACATCTGAAAATGGGCCAGATGTGAAACATGTGTTGAAGGCTAGCTTGGATGACACTAAGGTGGATCATTACGCAATTGGGACCTACTTCATTGAAAATGATACATGGGTGCCCGATAACCCGCATGAGGATGTGGGTATTGGGTTGAAATTGGACTATGGGAGATACTATGCGTCAAAGACATTTTATGACCAACTCAAACAGAGAAGGATCCTGTGGGGTTGGATTAATGAATCAGATAGTGAGACTGCTGACTTGAAAAAGGGTTGGGCATCTCTCCAGACTATTCCAAGAACAGTGGTGTTTGACAAGAAGACTAGAACTAATTTGCTTCATTGGCCAGTGGAAGAAGTAGAAAGCTTAAGACTTGGCAGTTCTGAATTTGAAGTTGTGGTTAAACCTGGCTCAGTTGTGCCACTGGACATAGGCCCAGCCACACAGTTGGACATATTTGCTGAATTTGAAATAGAATTTTTAGCATCCAAAGGGATTGGCAAGGACAATGTTGGCTGTGGAAATGGAGCTGTTGACAGAAGTGCTTTGGGACCATTCGGCATTCTGGCTATTGCAGATGACCAACTTTCTGAACTAACAGCCATTTATTTCCATCTTTCTAGTACTACTAGCGATGGCAGTTTAACCACTTCCTTCTGTGTTGATGAAACTAGGTCATCAAAGGCTCCTGATGTTTCAAAGCTCGTTTTTGGAAGCAAAGTTCCAGTTCTCAGTGATGAAAAATTATCAATGAGGGTATTGGTCGACCATTCAATCATTGAGAGCTTTGCTCAGGGAGGGAGAACAGTGATTTCATCTAGAGTTTATCCAACAGAAGCAATATATGGAGCAGCAAGATTGTTTCTGTTCAACAATGCGACGGACATAAACATCAAGGCCACCCTCAAGATTTGGCAATTGAACTCAGCTTTCATACGTCCCTTTCCCTTTGACCAGAAATCGTGA 1893 0.4437 MIPADLEHAPQIPLLNPPSSLARENGGRRLQKGTLVFVVSIVFLMSLFALIINLQRRHEPLENNNIAVSVPLVPRGVAEGVSAKSNPYLSQKASYNWTNAMLSWQRTAFHFQPQRNWMNGPLFYKGWYHIFYQYNPDSAVWGNITWGHAVSRDLIHWLYLPIALVPDSWFDINGVWSGSATLLPNGKIVMLYTGNTDQNVQVQNLAYPANLSDPLLHDWVKCANNPVLVPPPGIGSKDFRDPTTAWIGPDEKWRVTIGSKVNKTGLSLVYKTKDFIHYERNDHYLHTVPGTGMWECVDFYPVSVNGPSGLDTSENGPDVKHVLKASLDDTKVDHYAIGTYFIENDTWVPDNPHEDVGIGLKLDYGRYYASKTFYDQLKQRRILWGWINESDSETADLKKGWASLQTIPRTVVFDKKTRTNLLHWPVEEVESLRLGSSEFEVVVKPGSVVPLDIGPATQLDIFAEFEIEFLASKGIGKDNVGCGNGAVDRSALGPFGILAIADDQLSELTAIYFHLSSTTSDGSLTTSFCVDETRSSKAPDVSKLVFGSKVPVLSDEKLSMRVLVDHSIIESFAQGGRTVISSRVYPTEAIYGAARLFLFNNATDINIKATLKIWQLNSAFIRPFPFDQKS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02270 630 Gene3D Glycosyl hydrolase domain; family 43 114 437 IPR023296 -
Pumo11g02270 630 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 114 437 - -
Pumo11g02270 630 Pfam Glycosyl hydrolases family 32 C terminal 428 615 IPR013189 -
Pumo11g02270 630 Pfam Glycosyl hydrolases family 32 N-terminal domain 110 425 IPR013148 -
Pumo11g02270 630 Pfam Beta-fructofuranosidase, N-terminal domain 25 102 IPR021792 GO:0004564
Pumo11g02270 630 SUPERFAMILY Arabinanase/levansucrase/invertase 103 426 IPR023296 -
Pumo11g02270 630 CDD GH32_Fruct1-like 116 411 - -
Pumo11g02270 630 SUPERFAMILY Concanavalin A-like lectins/glucanases 425 620 IPR013320 -
Pumo11g02270 630 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 51 619 - -
Pumo11g02270 630 SMART glyco_32 110 576 IPR001362 GO:0004553|GO:0005975
Pumo11g02270 630 Gene3D - 438 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02270 Pumo-Chr11 55271497 55276998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02270 28 624 Glycoside Hydrolase AT1G12240 59.355 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02270 K01193 - gmx:100814788 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02270 11 55271497 55276998 Pumo11g02270 11 55271497 55276998 ECH