Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02226 ATGGATTTGGCATCAGGTGTTGGTGGAAAGATTGAAAAATCTCAAATTTTGTCCGCGGTTGAGAAGTATGAGAAGTATCATGTTTGTCATGGAGGCCAAGAGGAAGAGAGAAAAGCTAATTACACTGATATGGTTAATAAATACTATGATCTTTCTACTAGCTTTTATGAGTTTGGCTGGGGGCAATCTTTCCATTTTGCACACAGATGGAAAGGGGAATCTCTTCAAGAAAGCATTAAAAGACATGAGCACTTCCTTGCTTTACAACTTGGCCTAAAGCCTGGACAAAAGGTCTTGGACGTTGGATGTGGAATTGGGGGGCCACTAAGAGAAATTTCTCGTTTCAGCTCAACATCAGTTACAGGATTGAACAACAATGAGTATCAGATAACAAGAGGAGAGGCACTCAATCGCATTGCTGGAGTGGACAAGACTTGCAACTTTGTCAAGGCTGACTTCATGAAAATGCCATTCCAAGACAATAGTTTTGATGCAGTGTATGCAATTGAAGCCACCTGCCATGCACCAGATGCTTATGGATGCTACAAAGAGATCTTTAGAGTGTTGAAGCCTGGCCAATATTTTGCTGCATATGAATGGTGCATGACTAATGCTTTTGATCCCAACAACGAAGAGCACCAAAGGATAAAGGCAGAAATTGAGATTGGTGATGGACTTCCTGACATTAGATTGACCACAAAGTGTGCTGAAGCTCTGAAGCAAGCAGGTTTTGAGGTGATCTGGGAGAAAGATCTTGCAATTGACTCTCCTGTTCCTTGGTACTTACCTCTGGATACAAGTCATTTCTCAATCAATAGCTTTCGTCTAACTGCTGTTGGACGATTTTTCACAAGAAGCCTGGTCAAGGGACTAGAATTTGTTGGACTGGCTCCAAAAGGAAGTCTAAGGGTTCAAGAATTTCTTGAAAAGGCTGCAGATGGTCTAGTTGAAGGAGGAAAGAAAGAGATTTTCACACCAATGTACTTCTTTTTGGCTCGGAAGCCTGAGTCTAGCAGTCACTAA 1023 0.4184 MDLASGVGGKIEKSQILSAVEKYEKYHVCHGGQEEERKANYTDMVNKYYDLSTSFYEFGWGQSFHFAHRWKGESLQESIKRHEHFLALQLGLKPGQKVLDVGCGIGGPLREISRFSSTSVTGLNNNEYQITRGEALNRIAGVDKTCNFVKADFMKMPFQDNSFDAVYAIEATCHAPDAYGCYKEIFRVLKPGQYFAAYEWCMTNAFDPNNEEHQRIKAEIEIGDGLPDIRLTTKCAEALKQAGFEVIWEKDLAIDSPVPWYLPLDTSHFSINSFRLTAVGRFFTRSLVKGLEFVGLAPKGSLRVQEFLEKAADGLVEGGKKEIFTPMYFFLARKPESSSH 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02226 340 FunFam Methyltransferase 19 270 - -
Pumo11g02226 340 Pfam Sterol methyltransferase C-terminal 273 336 IPR013705 GO:0006694|GO:0008168
Pumo11g02226 340 PANTHER ZGC:194242 2 335 - -
Pumo11g02226 340 CDD AdoMet_MTases 97 192 - -
Pumo11g02226 340 Gene3D Vaccinia Virus protein VP39 19 268 IPR029063 -
Pumo11g02226 340 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 48 335 IPR030384 GO:0008168
Pumo11g02226 340 Pfam Methyltransferase domain 99 196 IPR013216 GO:0008168
Pumo11g02226 340 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 39 336 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02226 Pumo-Chr11 54766201 54769973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02226 83 251 Acyl Lipid Metabolism Gene Families AT1G48600 33.136 5.87e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02226 K00559 - gmx:100818061 681.789