LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo11g02205	ATGAGGAAAAGCTCATATGTTGGCGATGCTAAAGATGTTGTGGAGCTTCTTGAGGCCTCACATTTGGGCTTAGAAGGAGAGAAGATATTGGATGAGGCCAAAACTTGTGCCATAAATTTTCTCAAGGATGCTTTCTCTCCCAGTGCCAGTCCCAGTTCCAGTTCCAGTTCCAGTTCCATCAACATCAACCAACTCTCCAACCTGCAGGTTGTTGAAAAAATGGTCCATGCCTTGGAGCTTCCATCCCATTGGAGAGTTCCGTGGTTTGACGTCAAATGGCACGTGGAGCAATACAACAAGGAGAAACACATGGACCCCGTTTTACTTGAATTGGCTAAATTAAACTTCAACACCATTCAGGCCACACTTCAATTCGAGGTCAAGGAGTTATCCAGGTGGTGGGAGAATCTTGGCATAAAAAAAGAGTTGAGCTTTGCAAGGAATAGGTTGGTTGAAAGCTTCATGTGTGCAGCAGGAGTTGCCTCTGAGCCCAAATACAAATCCCTCAGAAAATGGCTCACCAAAGTTATTATTTTCGTACTAATCATTGATGATGTTTATGATATACACGCCTCATTTGAAGAGTTGAAGCCGTTCACATTGGCGTTTGAGAGATGGGACGACAAAGAACTTGAAGAACTTCCAGCGTACATGAGAATTTGCGTCCGTGCACTTAAACAAGTTACAGATGAAATTGCTTATGAAATTGGCGGAGAAAATAACTTTCACTTGGTGTTACCTTACCTAAAGAAAGCGTGGATAGACTTTTGCAAAGCGTTATACGTGGAGGCAAAGTGGTACAACAAGGGATACATTCCATCGTTGCAAGAATATTTAAGCAATGCTTGGATTTCATCTTCGGGGCCAGTAATTTTACTCCATTCATATTTTGCTACAATGTATCAAGAGAAGGATGCGATAGACGATTTTCTAGACACATATGAAGATTTGGTCTACAACGTATCTCTTGTAATTAGACTGTGCAATGATTTAGGGACCACAGTGGCTGAAAGAGAAAGGGGTGATGCTGCTTCGTCAATCCTATGCTGTATGAATCACATGGATGCTTCAGAGGAAAAAGCAAGAAAGCACATCCAAGACATGATACGCGAAGCATGGAAAAAAATAAATGGGCACTGTTCCACTTCCAGTACTCGAGTTGGTTCGGTGGAGCCATTTCTTTCTCAAGCCATAAATGCAGCTCGTGTGGCCCATACCCTTTATCAAAATGGGGATGGGTTTGGCATCCAAGACCGAGATATCAAAAAGCATATATTATCACTAATTGTTGAACCCCTTTAA	1302	0.4217	MRKSSYVGDAKDVVELLEASHLGLEGEKILDEAKTCAINFLKDAFSPSASPSSSSSSSSININQLSNLQVVEKMVHALELPSHWRVPWFDVKWHVEQYNKEKHMDPVLLELAKLNFNTIQATLQFEVKELSRWWENLGIKKELSFARNRLVESFMCAAGVASEPKYKSLRKWLTKVIIFVLIIDDVYDIHASFEELKPFTLAFERWDDKELEELPAYMRICVRALKQVTDEIAYEIGGENNFHLVLPYLKKAWIDFCKALYVEAKWYNKGYIPSLQEYLSNAWISSSGPVILLHSYFATMYQEKDAIDDFLDTYEDLVYNVSLVIRLCNDLGTTVAERERGDAASSILCCMNHMDASEEKARKHIQDMIREAWKKINGHCSTSSTRVGSVEPFLSQAINAARVAHTLYQNGDGFGIQDRDIKKHILSLIVEPL	433

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo11g02205	433	SFLD	Isoprenoid Synthase Type I	105	432	-	-
	Pumo11g02205	433	SUPERFAMILY	Terpenoid synthases	104	433	IPR008949	-
	Pumo11g02205	433	Gene3D	Farnesyl Diphosphate Synthase	105	423	IPR008949	-
	Pumo11g02205	433	Pfam	Terpene synthase family, metal binding domain	109	375	IPR005630	GO:0000287\|GO:0010333\|GO:0016829
	Pumo11g02205	433	SFLD	Terpene Cyclase Like 1 C Terminal Domain	105	432	IPR034741	-
	Pumo11g02205	433	PANTHER	OS04G0344100 PROTEIN-RELATED	7	413	-	-
	Pumo11g02205	433	FunFam	Isoprene synthase, chloroplastic	89	423	-	-
	Pumo11g02205	433	Gene3D	-	3	104	IPR036965	GO:0010333\|GO:0016829
	Pumo11g02205	433	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	3	102	IPR008930	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo11g02205	Pumo-Chr11	54535719	54537901	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo11g02205	K14173		-	gmx:100812119	711.064