Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02187 ATGGCGCTTAAAACCCTATCCACTTTCCTCTCACCTCTTTCTCTCCCCAACCCCAAATTCCTCACCACCAACACCAACACCAAGCCTTGTCTCATTCTCTGCTCTCAGAAATCGCGTTTGCCCGCCGCCGATTCGGAAGGCACCGGCGCCGCCGCTCCTTCGCCAGGCGAGAAGTTCCTCGAGCGCCAGCAGTCCTTCGAAGCTGCTAAGCTCATCCTTAAAGAGAACAAGAAGAAGAGAAAGAAGAAAGAGGATGCTATAAAAGCTTCCAGAGCCGTCGCTTCTTGCTACGGCTGCGGCGCTCCGTTACACACTTCCGATGCCGATGCCCCTGGCTACGTCGATCCAGAAACCTATGAATTGAAGAAGAAACACCACCAGCTTCGAACCGTTCTGTGTAGGCGGTGCCAGCTTTTGTCTCATGGCAAGATGATAACTGCTGTTGGAGGACACGGAGGATACCCTGGTGGTAAATTATTTGTCACTGCTGAAGAGCTTCGACAAAAGTTGTCTCACCTGCGTCACGAGAAAGCTCTAATTGTCAAATTGGTTGATATTGTTGACTTCAATGGCAGTTTTTTGTCTCGTGTTCGAGATCTTGCTGGTTCTAATCCAATAATATTGGTGGTGACTAAGGTTGATCTCCTTCCAAGAGATACTGATCTTAATTGTGTTGGGGATTGGGTTGTAGAGGCTACTATGAGAAAGAAGCTAAATGTTCTCAGCGTCCATCTGACCAGTTCCAAATCATTGGTTGGAATAACTGGAGTGATATCAGAAATCCAGAAAGAGAAGAAGGGAAGAGATGTTTACATTCTGGGTTCAGCTAATGTTGGGAAATCTGCTTTCATCAATGCTTTACTAAAAACAATGGCTATAAATGATCCAGTGGCTGCATCTGCACAAAGATACAAACCAATACAATCTGCAGTTCCTGGAACTACCTTAGGGCCAATTCAAATTAATGCTTTCCTAGGAGGAGGGAAATTGTATGACACCCCTGGAGTTCATCTCTACCATAGGCAAACTGCAGTTGTTCATTCTGAAGATCTATCCATCCTTGCTCCTCAAAGCCGACTGAGGGGCCGGTCTTTCCCAAGTTCTATAGTATCTTCAGACAATGTAGAGGAAGGAGCTTCCACCGTAGTGAATGGCTTGAATGCATTTTCAATATTTTGGGGAGGTCTTGTTAGAATTGATGTCTTGAAGGTTCTCCCAGAAACTTGTTTGACATTTTATGGACCCAAGAGACTACCGATTCATATGGTACCCACAGAGCAAGCAGTTGAATTTTATCAGAAAGAACTTGGAGTTCTGCTGACCCCGCCAAGTGGAGGAGAAAATGCTGAGAACTGGAAAGGACTTGAATCAGAACGTAAATTGCAAATAAAATTCGAAGACGTGGACAGACCAGCTTGTGATATAGCTATATCAGGTCTAGGATGGTTTACTGTTGAGCCAGTTAGTAGGTCACTCAAAATGTCACAACCAAAACCGGTAGAGACTGCTGGGGAAGTGATTTTGGCCGTGCACCTCCCCAAGCCTGTTGAGATTTTTGTGAGGCCACCAATACCAGTAGGGAAGGCTGGAGCAGAGTGGTACCAGTATGTAGAATTAACAGAGAAAGAAGAGGAAATGAGACCAAAATGGTACTTTTAA 1659 0.4539 MALKTLSTFLSPLSLPNPKFLTTNTNTKPCLILCSQKSRLPAADSEGTGAAAPSPGEKFLERQQSFEAAKLILKENKKKRKKKEDAIKASRAVASCYGCGAPLHTSDADAPGYVDPETYELKKKHHQLRTVLCRRCQLLSHGKMITAVGGHGGYPGGKLFVTAEELRQKLSHLRHEKALIVKLVDIVDFNGSFLSRVRDLAGSNPIILVVTKVDLLPRDTDLNCVGDWVVEATMRKKLNVLSVHLTSSKSLVGITGVISEIQKEKKGRDVYILGSANVGKSAFINALLKTMAINDPVAASAQRYKPIQSAVPGTTLGPIQINAFLGGGKLYDTPGVHLYHRQTAVVHSEDLSILAPQSRLRGRSFPSSIVSSDNVEEGASTVVNGLNAFSIFWGGLVRIDVLKVLPETCLTFYGPKRLPIHMVPTEQAVEFYQKELGVLLTPPSGGENAENWKGLESERKLQIKFEDVDRPACDIAISGLGWFTVEPVSRSLKMSQPKPVETAGEVILAVHLPKPVEIFVRPPIPVGKAGAEWYQYVELTEKEEEMRPKWYF 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02187 552 Pfam 50S ribosome-binding GTPase 270 337 IPR006073 GO:0005525
Pumo11g02187 552 Gene3D - 164 340 IPR027417 -
Pumo11g02187 552 PANTHER NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 38 552 IPR044229 GO:0003924
Pumo11g02187 552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 341 IPR027417 -
Pumo11g02187 552 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 163 339 IPR030378 GO:0005525
Pumo11g02187 552 CDD YqeH 133 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02187 Pumo-Chr11 54290257 54296039 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02187 K13427 - gmx:100798614 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02187 11 54290257 54296039 Pumo11g02187 11 54290257 54296039 ECH