Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02181 ATGGCGTCCTCTCTCATTGCGAAGCGCTTCCTCTCCTCTTCCCTCCTCTCCAGGTCTCTCCTTCGTCCCGCCGCTTTTGCTTCCCGCTCTTTCAACACCAACGCCATGCGCCAGTACGACGACCGCGCCGACGACCATGACGTCGACGTCGATCGTCGCTCCGAACGCTCTTTCCCTCGCACTCGCGACGATATCTTCTCAGACGTGTTGGATCCGTTTTTTCCGACTCGGAGTTTGAGTCAGGTTCTGAACATGATGGATCAGTTCATGGACAATCCGTTCCTCTCCGCGTCGCGCGGTATCGGAGCTGGAGCCGGAGTGCGTCGCGGATGGGACGCGAGAGAGACAGAGGATGCTCTGCTTCTCCGCGTAGACATGCCTGGGCTTGGCAAGGAAGACGTCAAGATCTCTGTGGAGCAGAACACTCTTACTATCAAAGGTGAAGGTGCTAAAGAAGGCGAGGAGGAAGAGAGCGCTCGTCGCTACACTAGCAGGATTGACTTGCCGGACAAGCTTTACAAGATTGACCAGATCAAAGCTGAGATGAAGAACGGTGTGCTCAAGGTTGTTGTGCCTAAAATGAAGGAAGAGGAGAGGAAAGATGTCATCAATGTTAAGGTTGAATAG 627 0.5407 MASSLIAKRFLSSSLLSRSLLRPAAFASRSFNTNAMRQYDDRADDHDVDVDRRSERSFPRTRDDIFSDVLDPFFPTRSLSQVLNMMDQFMDNPFLSASRGIGAGAGVRRGWDARETEDALLLRVDMPGLGKEDVKISVEQNTLTIKGEGAKEGEEEESARRYTSRIDLPDKLYKIDQIKAEMKNGVLKVVVPKMKEEERKDVINVKVE 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02181 208 Pfam Hsp20/alpha crystallin family 113 207 IPR002068 -
Pumo11g02181 208 Gene3D - 62 207 IPR008978 -
Pumo11g02181 208 FunFam 23.6 kDa heat shock protein mitochondrial 60 207 - -
Pumo11g02181 208 SUPERFAMILY HSP20-like chaperones 79 200 IPR008978 -
Pumo11g02181 208 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 27 203 IPR044656 -
Pumo11g02181 208 CDD ACD_sHsps-like 112 193 - -
Pumo11g02181 208 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 102 208 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02181 Pumo-Chr11 54240958 54242194 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02181 K13993 - gmx:547852 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02181 11 54240958 54242194 Pumo11g02181 11 54240958 54242194 ECH