Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02176 ATGGCTGTTGAGACTTCCGATAAACCAAAACCAAATGTACCACATGATTTTGATGATGATGATGATGGCCCAATAATTCTGAAAAGGTACTCATCATCTAAGAAAAATCAATTGCATTCAGAAGTTAGAAAGTCAAGTTCTCACATTCACGATGGACAGTCATATAGACAGATTTCTAATGCACCTTCTTTGAATGGCCACACTTCTAGCATGCAGAAAGGTAATACTGCTCCATCTGCTAAGCCATCACCCGTGAAGCCTTCTGTAGGTATCTCAAAAGCTTCAAATTCTCTTGTCAACACCTCCTCTATGAAGTTGCCTGTAGCAAATTCAAAATCACCTTTATTGGGAGTTAAACAGAAAATGTCCGTTGATGTTAAGGAGGAACCAAAATCTATTGAATGTTGTGCTAACAATTTTTGTGAAGATTCAGAAGATGATAAGGATTATAAACCGTTGAGTTTTAGGTTGAAGAATTCAAACCATGATAACAAAGCAACCCCTGTTGTTGCCAAGAAATCTTCTGAAGACTCTGATGATGATGATGATGTCTCTTTGGCAAAAAAGTTATACCGTAATTCCAATTTGGGAACAACTTGCAGCAACCATGATGTCTCTGATCAGAAGAAGCCTATTTCTAAAATTCAGAAAGAGCAGCAAAATGGTTCTGGTGCGAGTAATAAACAGGATAGCCCATCTCCATTGCCAGCTAAGAGACCACTAGATAATTGTAATTCCTTGCACCACTCTATCAAGAAGTCAAAGGTCTCAGATCCAGCTGTATCTATCAAAACTAAGCCAGTCTCTGGGAAACATGAACTGAAGGTAGTGGATGATGATGATGATGATGACATTCCTATTTCCCAGAGAATAAAGAAGTCGGCCATGTCAGGTGATAAGCTCATTTCTAAAATTCAGATAGAGCGGCAAAATGGTTCTGGTTCTGGCACAAGTAATAAACAGGATAGGCCATCTCCATTGCCAGCTAAGAGACCACTAGATAAAAGTAATTCCTTGCATCCCTCTGTTAAGAAGTCAAAGGTCTCAAGTCTAGCTGCATCTATCAAAACTAAGCGAGTCTTTGGGAAACGTGAGCTGAAGGTAGAGGAAGATGATGATGCTCATATTCCTATTTCCCAGAGAATAAAGAAGTTGGTCATGTCAGGTTATAATCTTATTTCTAAAATTCAGATGGAGCGGCAAAATGGTTCTGGCACGAGTAATAAACAGGATAGGCCATTTCCATTGCCAGCTACGAGACCACTAGTTAATAGTAATTCTTTGCACCCCTCTGTTAAGAAGTCAAAGGTCTCAGATCTAGCCGCATCTATCAAAACTAAGCCAGTCTCTGGGAAACATGAGCTGAAGGTAGAGGAGGAGGATGATGATGATATTCCTATTTCCCAGAGAATAAAGAAATCAGCCATGTTAGGTGATAAATCCTCTTCCACGAAGAAGGTGCGGACAAAGGTTACTAAAGTTAATAAGTCTGGTTCAAAACCTTTTAAGAAACAAACCAAGAAGACAGTTAAAAAATCAAGCAGTGGTTCAGAATACTCCAAATCTACAAAACTTCTTCCTAGCTCTGGTGATGGGCAGAAAAAATGGTCTACTTTGGTTCACAATGGTGTCATTTTCCCTCCTCCGTATCAGCCACATGGGGTAAAGATGCTCTATAAGGGGAAACCAGTTGATTTGACTCCTGAGCAAGAGGAGGTTGCTACAATGTATGCAGTCATGCAAGATACAGAGTACATTCTGAAAGATAGGTTCAAGGAAAATTTCTGGAATGACTGGCAAAAGTTGCTTGGAAGAAACCATGTAATCCAGAGCTTGAAAGATTGTGATTTTTCTCCAGTCTATGACTGGTACCAAAGTGAGAAGGAAAAGAAGAAACAAATGACTACAGAAGTTGGTAATTTGGCTTTGAAGGAAGAGAAATTGAAACCAGAGGAGAAATACATGTGGGCTATTGTCGATGAAGTTAAAGATAAGGTTGGGAATTTTAGAGCTGAACCACCAGGGCTGTTCGGAGGCCGAGGAGAGGACCCCAAGTCGCAGTTTTATGCATCCATTGATGATGATGTTGACGAAGATATTGTCATCCAGGAGATAGCACTTCTGCTGATCAATTTTGCAGCGAATCCGAAAGTAGAGTATTTTGTTGAAGAACCAGATGATGATCAACCCTTCAGACCAGTGGATGCTGAGGATCTTCGTGTTCGTGTTGATATTCTGCAAGAGCAACTCCACGCCTTAAAAGATGAATTGCGCGAGGAAAGACGATTGCGCATTCAAGCTGATCATGAGCTCTACAGGCTTTTTCATAAACCTTGA 2337 0.4027 MAVETSDKPKPNVPHDFDDDDDGPIILKRYSSSKKNQLHSEVRKSSSHIHDGQSYRQISNAPSLNGHTSSMQKGNTAPSAKPSPVKPSVGISKASNSLVNTSSMKLPVANSKSPLLGVKQKMSVDVKEEPKSIECCANNFCEDSEDDKDYKPLSFRLKNSNHDNKATPVVAKKSSEDSDDDDDVSLAKKLYRNSNLGTTCSNHDVSDQKKPISKIQKEQQNGSGASNKQDSPSPLPAKRPLDNCNSLHHSIKKSKVSDPAVSIKTKPVSGKHELKVVDDDDDDDIPISQRIKKSAMSGDKLISKIQIERQNGSGSGTSNKQDRPSPLPAKRPLDKSNSLHPSVKKSKVSSLAASIKTKRVFGKRELKVEEDDDAHIPISQRIKKLVMSGYNLISKIQMERQNGSGTSNKQDRPFPLPATRPLVNSNSLHPSVKKSKVSDLAASIKTKPVSGKHELKVEEEDDDDIPISQRIKKSAMLGDKSSSTKKVRTKVTKVNKSGSKPFKKQTKKTVKKSSSGSEYSKSTKLLPSSGDGQKKWSTLVHNGVIFPPPYQPHGVKMLYKGKPVDLTPEQEEVATMYAVMQDTEYILKDRFKENFWNDWQKLLGRNHVIQSLKDCDFSPVYDWYQSEKEKKKQMTTEVGNLALKEEKLKPEEKYMWAIVDEVKDKVGNFRAEPPGLFGGRGEDPKSQFYASIDDDVDEDIVIQEIALLLINFAANPKVEYFVEEPDDDQPFRPVDAEDLRVRVDILQEQLHALKDELREERRLRIQADHELYRLFHKP 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02176 778 MobiDBLite consensus disorder prediction 9 50 - -
Pumo11g02176 778 Gene3D - 551 631 IPR013034 GO:0003917|GO:0006265
Pumo11g02176 778 MobiDBLite consensus disorder prediction 449 469 - -
Pumo11g02176 778 Coils Coil 736 770 - -
Pumo11g02176 778 MobiDBLite consensus disorder prediction 397 532 - -
Pumo11g02176 778 FunFam DNA topoisomerase I 550 634 - -
Pumo11g02176 778 Pfam Eukaryotic DNA topoisomerase I, DNA binding fragment 535 686 IPR008336 GO:0003677|GO:0003917|GO:0006265
Pumo11g02176 778 MobiDBLite consensus disorder prediction 1 98 - -
Pumo11g02176 778 MobiDBLite consensus disorder prediction 169 188 - -
Pumo11g02176 778 PANTHER DNA TOPOISOMERASE I 367 686 - -
Pumo11g02176 778 Gene3D DNA Topoisomerase I, domain 2 632 705 IPR013030 GO:0003677|GO:0003917|GO:0005694|GO:0006265
Pumo11g02176 778 SUPERFAMILY Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment 530 686 IPR036202 GO:0003677|GO:0003917|GO:0005694|GO:0006265
Pumo11g02176 778 MobiDBLite consensus disorder prediction 137 350 - -
Pumo11g02176 778 MobiDBLite consensus disorder prediction 191 206 - -
Pumo11g02176 778 MobiDBLite consensus disorder prediction 215 233 - -
Pumo11g02176 778 MobiDBLite consensus disorder prediction 51 82 - -
Pumo11g02176 778 MobiDBLite consensus disorder prediction 512 532 - -
Pumo11g02176 778 MobiDBLite consensus disorder prediction 141 158 - -
Pumo11g02176 778 MobiDBLite consensus disorder prediction 397 413 - -
Pumo11g02176 778 MobiDBLite consensus disorder prediction 304 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02176 Pumo-Chr11 54196794 54200488 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02176 K03163 - gmx:100799837 457.988