Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02145 ATGGCGATATCAGTGAAAGTCAGCAACATCTCTTCAAGTGCAACCGAGCAAGATTTGAGAGAATTTCTTACCTTTCCAGGAAAAATCGAATATATTGAAATGCAAAGTGATAAGGAAAATTCCCAAGTTGCGTATGTTACCTTCAGTAATCCAGAGGGGGCAGAAACTGCAGTTCTTCTCTCGGGAGCAGTGGTGTGTGGACAGTCTCTAACCATAGATTTGGCTCCGGATTATGCTCTGCCTGCCTCTGCTGCATCTGTAACACGGACTAGTAATGCTGAAAGTGGTGAATCTGGTTTGAGAAAGGCAGAGGATGTTGTAACCGGCTTGCTAGCCAAGGGCTTCATTTTGGGTAAAGATGCATTGAATCGAGCAAAATCCTTTGATGAAAGGCACCAGCTGACTTCCACGGCAACAGCAAAAGTTGTTTCTTTGGACCAGAAGGTTGGTTTTACTGAAAAGATAAGTGCTGGTACAATTATAGTGAATGACAAAGTGAAAGAAATGGATGAGAAATATCAAGTCTCGGAGAAGACTAGATCTGCAATTTCAGCAGCTGAGCAGTCAGTGTCTAGTGCTGGATCTGCCATAATGAAGAATCGTTATGTGTTGACTGGGGCTACATGGGTAACTGGTGCTTACAGCAGGGTTGCTAAGGCAGCTGAGGAGGTGGGACAGAAAACTAAGGAGAAGGTTATGGCGCAGGATAATCAAGGAAAGACTGAAGAACCTACCACTCCTAATCAACCCTCCAAACCTGAACCTCAGCAGGCAACCACAGCTAATCAACCTTCCAAACCTGAACCTCAGCAAGCAACCACAGCTAATCAACCCTCCACACCTGAACCTCAGCAGGCCACCACAGCTAGTCAACCCTCCAAACCTGAACCTCAACAGGCCACCAAGGAAGGTCATCCTTCCAATCCTGCAACAACTAAAGGTTGA 945 0.4571 MAISVKVSNISSSATEQDLREFLTFPGKIEYIEMQSDKENSQVAYVTFSNPEGAETAVLLSGAVVCGQSLTIDLAPDYALPASAASVTRTSNAESGESGLRKAEDVVTGLLAKGFILGKDALNRAKSFDERHQLTSTATAKVVSLDQKVGFTEKISAGTIIVNDKVKEMDEKYQVSEKTRSAISAAEQSVSSAGSAIMKNRYVLTGATWVTGAYSRVAKAAEEVGQKTKEKVMAQDNQGKTEEPTTPNQPSKPEPQQATTANQPSKPEPQQATTANQPSTPEPQQATTASQPSKPEPQQATKEGHPSNPATTKG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02145 314 MobiDBLite consensus disorder prediction 222 237 - -
Pumo11g02145 314 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 3 77 IPR000504 GO:0003723
Pumo11g02145 314 SUPERFAMILY RNA-binding domain, RBD 4 77 IPR035979 GO:0003676
Pumo11g02145 314 Gene3D - 3 79 IPR012677 -
Pumo11g02145 314 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 4 240 - -
Pumo11g02145 314 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6 70 IPR000504 GO:0003723
Pumo11g02145 314 SMART rrm1_1 4 73 IPR000504 GO:0003723
Pumo11g02145 314 MobiDBLite consensus disorder prediction 238 314 - -
Pumo11g02145 314 MobiDBLite consensus disorder prediction 222 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02145 Pumo-Chr11 53816256 53818921 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02145 - - gmx:100784398 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02145 11 53816256 53818921 Pumo11g02145 11 53816256 53818921 ECH