Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02115 ATGGCCGCCGAGAAGCTCCGAGATTTGAGCCAGCCGATTGACGTCCCCTTGCTCGACGCCACCGTCGCCGCCTTCTATGGCACCGGATCTAAAGAGGAGAGAAATGCCGCTGATCAGATTCTGCGCGACTTGCAAAATAATCCCGATATGTGGCTTCAAGTCATGCATATTTTGCAAAAAACTCAAAATCTGAATACCAAGTTCTTTGCCTTACAGGTTCTAGAAGGCGTAATTAAGTATAGATGGAATGCATTACCTGTTGAGCAGCGAGATGGAATGAAAAATTTCATCTCTGATGTTATTGTTCAGCTTTCTAGCAATGATACTTCATTTCGAGCAGAAAGGTTGTATGTCAACAAACTCAATATTATATTAGTTCAGATTTTGAAGCATGAGTGGCCAGCAAGATGGCGAAGCTTTATTCCTGACCTAGTTTCAGCTGCTAAAACTAGTGAAACAATTTGTGAAAATTGTATGGCTATATTGAAACTTTTGAGTGAAGAGGTTTTTGATTTTTCAAGAGGAGAGATGACTCAGCAGAAGATAAAAGAGCTTAAACAATCATTGAACAGGTAA 576 0.4062 MAAEKLRDLSQPIDVPLLDATVAAFYGTGSKEERNAADQILRDLQNNPDMWLQVMHILQKTQNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNFISDVIVQLSSNDTSFRAERLYVNKLNIILVQILKHEWPARWRSFIPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQKIKELKQSLNR 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02115 191 Coils Coil 175 191 - -
Pumo11g02115 191 Gene3D - 1 191 IPR011989 -
Pumo11g02115 191 SMART IBN_N_2 37 103 IPR001494 GO:0006886|GO:0031267
Pumo11g02115 191 SUPERFAMILY ARM repeat 22 189 IPR016024 -
Pumo11g02115 191 Pfam Importin-beta N-terminal domain 37 103 IPR001494 GO:0006886|GO:0031267
Pumo11g02115 191 ProSiteProfiles Importin-beta N-terminal domain profile. 37 103 IPR001494 GO:0006886|GO:0031267
Pumo11g02115 191 Pfam Exportin 1-like protein 115 190 IPR013598 -
Pumo11g02115 191 PANTHER EXPORTIN 1/5 4 191 IPR045065 GO:0005049|GO:0006611
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02115 Pumo-Chr11 53406765 53409100 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02115 K14290 - gmx:100802384 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02115 11 53406765 53409100 Pumo11g02115 11 53406765 53409100 ECH