Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02112 ATGGCTCAATTGTCTTCCCCTCAAACCTTTTCTCTTCCGGCTCCAATCCCTCAATGGCCTCAAGGACAAGGTTTTGCTTCCGGCGTTGTAAATCTTGGTGAAATAGAAGTTTCCAAGGTCACTAGGTTTGAGTTTATTTCAAGCAGCAGTGCTAGGCTAGACACAAAAAAAGCTGTCACATTCTATAGGCCTTTGGGAGTTCCAGAAAGTTTCCATATCCTTGGTCACTATTGTCAACCCAGTGGCAAGCCTTTACATGGTTTTGCACTTGTTGCTAGGGAAGTGGAAACTTGCTTGCCTGAAAATGCTGATACTAACAACCAAGATAAGTTACCTCCTCTGAAGAACCCCCTTGATTTTAAGTTAGTTTGGAGTCAAAATGCAGGAAGTTTGGAAATATCAGGTGTATACTTTTGGCTACCTGAACCTCCTGAAGGTTACAAGGCCCTTGGCTATTTGGTTACTAACAAACCTGACAAACCTTTGTTGGATGAAATGTGTTGTGTTCGTACCGACCTCACTGATAAATGTGAACCTTACTGCCTAATACTCACTGCAGGTTCTAGAATTCCAGAGTTTTCATTTCAGGTATGGAGTTTGAGACCTTGTGACCGTGGCATGCTAGGGAAAGGAGTTTCTGTTGGGACTTTTTTCTGCAGTGGTGACTGGACCATGAGAGAAGAGCTGCCTGTTGCTTGCTTGAAGAACCTAAATCCTGTGCTACCAGCAATGCCAAATTTGCAACAAATACATGCACTTATTAAGCATTATGGCCCTACTGTTTTCTTCCATCCTCAGGAAAAATACTTGCCATCTTCTGTGGAATGGTTTTTCAACAATGGAGCCATGTTGTACAAAAAGGGTGTGTCTAGAGGAGAGGGAATTGATGCAACTGGCTCAAATCTGCCAAGTGGGGGAACAAATGATGGCCAATTTTGGATAGACTTGCCAAGTGATGATAGAAAGAATTTTGTCAAACGCGGGCACTTGAAGAGTGCAAGGCTTTATGTTCATGTGAAGCCAGCTCTTGGTGGAACTTTCACTGACATTGCAATGTGGGTGTTTTGCCCTTTCAATGGGCCAGCCACTCTGAAAATTGGAATTAAGAATATTCCATTGAGAAAGGTTGGAGAGCATGTTGGTGACTGGGAGCATTTTACACTTCGTATATGCAACTTCAGTGGAGAGCTCTATAGTATATACTTCTCACAGCACAGTGGTGGTGAATGGGTTGATGCCTATGACTTGGATTATATTGAAGGCAATAAGGCTATTGTTTACTCATCAAAATGTGGACATGCAAGTTACCCTCATCCTGGGACCTATATGCAAGGTTCTTCAAAACTTGGGATTGGCATTAGGAATGATGCTGCTCGCAGTAATTTGTATGTGGATTCTAGTGTTCAATATGAGCTTGTTGCAGCTGAGTATCTTGAAAATGATGTCACTGAGCCTCAATGGTTGCAGTTTATGAGAGAGTGGGGACCCAAAATTGTTTATGATTCAAAAACTGAGCTGGATAAGGTAATCAATGCTCTTCCAAGATTGCTTAGATATTCAGTGAAGAATTTATTTAACAAGTTTCCAGTGGAACTTTATGGTGAGGAAGGTCCCACAGGGCCAAAAGAGAAAAATAATTGGATACAGGATGAAAGATGGTAA 1662 0.4194 MAQLSSPQTFSLPAPIPQWPQGQGFASGVVNLGEIEVSKVTRFEFISSSSARLDTKKAVTFYRPLGVPESFHILGHYCQPSGKPLHGFALVAREVETCLPENADTNNQDKLPPLKNPLDFKLVWSQNAGSLEISGVYFWLPEPPEGYKALGYLVTNKPDKPLLDEMCCVRTDLTDKCEPYCLILTAGSRIPEFSFQVWSLRPCDRGMLGKGVSVGTFFCSGDWTMREELPVACLKNLNPVLPAMPNLQQIHALIKHYGPTVFFHPQEKYLPSSVEWFFNNGAMLYKKGVSRGEGIDATGSNLPSGGTNDGQFWIDLPSDDRKNFVKRGHLKSARLYVHVKPALGGTFTDIAMWVFCPFNGPATLKIGIKNIPLRKVGEHVGDWEHFTLRICNFSGELYSIYFSQHSGGEWVDAYDLDYIEGNKAIVYSSKCGHASYPHPGTYMQGSSKLGIGIRNDAARSNLYVDSSVQYELVAAEYLENDVTEPQWLQFMREWGPKIVYDSKTELDKVINALPRLLRYSVKNLFNKFPVELYGEEGPTGPKEKNNWIQDERW 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02112 553 PANTHER BNAC01G40110D PROTEIN 4 553 - -
Pumo11g02112 553 Pfam Vacuolar protein sorting-associated protein 62 7 551 IPR009291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02112 Pumo-Chr11 53387976 53390196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02112 - - gmx:100793026 1007.67