Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02092 ATGGGTTCCACAAATCCATTATTCTCAAGTTTCACTTTCTTCTATTTCCATTTCTCATCGGAGCCACCTTCAATTTCCGATTCATTCTCACCGTTAAACCCAACCCTAGCCATGGACAGCCTCCAAGCCACTTACAAAGACGAAGAAGATGAAGAAGAAGATGCCCAACCACCACCAACCACCGCCGGAGCCACCGACGCCGAATCGCCGGAAGCCCCTCCAGCCACCACCAGCACCCCGTCCGACACCCCAACCGAGCCCCCGAACGACGCCAGATCGGAGCCCGACCCCTCCGACGACCTCTCCGACGACGAGGCCGCGTCCGACGGCTCCAAAAAGTCCCCGAAATCGGGCCGCGAGGAAGGCGACGCCTCCGACGAGGACCCGCCGCCGAAGAAGCAGAAGCAGCTCTCCTCTCTGACGGAGGCGACGAAGGAGGACTCGCCGGCGCCGCAGGATGGCGCCAACGCGGCGGCGACGCCGGTAACGAACGGCACTGCGCCGAAGAAATCGAAGAAGAAGAACAACAACGTGTGGGCGACGAAGTCGACACGGAAGGGGAAGAAGAAGAATAACCGCAACAACAATAACAACAACAGCAACCACCACGCGAACGGCGAGGACAACGTGCTGATAACGCCGGTGCCGCGGTTCCCGGACAAGAGCGACGACACGGCGGAGATGAAGATATGCCTCTCGAAGGTGTACAAAGCGGAGAAGGTGGAACTGAGCGAGGACAGAATGAGTGCGGGGAGCACCAAGGGTTACAGAATGGTGAGGGCCACGCGCGGGGTCGTGGAAGGCGCGTGGTACTTCGAGATTAGGGTTGTGAAGTTGGGGGAGAGTGGGCACACGCGCCTTGGGTGGTCCACTGAGAAGGGTGATTTGCAGGCTCCGGTTGGGTACGATGGGAACAGTTTTGGGTATAGGGATATTGATGGGAGTAAGATTCATAAGGCTCTTAGGGAGAAGTATGGAGAGGAAGGTTACAAGGAAGGTGATGTTATTGGTTTCTATATCAATTTGCCTGATGGGGAACAGTATGCCCCCAAAACAGGTCAATTGGTTTGGTATAAGGGGCAGCGATATGTTTATGCACAGGATACTAAGGAAGATCCACCCAAAGTAGTGCCTGGAAGTGAGATATCATTCTTTAAAAATGGCATATGCCAAGGTGTAGCTTTCAAGGATCTTCACGGTGGTCGTTACTATCCTGCTGCTTCAATGTTTACTCTCCCCAATGAACCAAACTGCACGGTCAAGTTCAACTTTGGTCCCGACTTTGAATGTTTTCCTGAGGATTTCAAGTGA 1311 0.5439 MGSTNPLFSSFTFFYFHFSSEPPSISDSFSPLNPTLAMDSLQATYKDEEDEEEDAQPPPTTAGATDAESPEAPPATTSTPSDTPTEPPNDARSEPDPSDDLSDDEAASDGSKKSPKSGREEGDASDEDPPPKKQKQLSSLTEATKEDSPAPQDGANAAATPVTNGTAPKKSKKKNNNVWATKSTRKGKKKNNRNNNNNNSNHHANGEDNVLITPVPRFPDKSDDTAEMKICLSKVYKAEKVELSEDRMSAGSTKGYRMVRATRGVVEGAWYFEIRVVKLGESGHTRLGWSTEKGDLQAPVGYDGNSFGYRDIDGSKIHKALREKYGEEGYKEGDVIGFYINLPDGEQYAPKTGQLVWYKGQRYVYAQDTKEDPPKVVPGSEISFFKNGICQGVAFKDLHGGRYYPAASMFTLPNEPNCTVKFNFGPDFECFPEDFK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02092 436 Gene3D - 228 436 IPR043136 -
Pumo11g02092 436 Pfam SPRY domain 270 346 IPR003877 GO:0005515
Pumo11g02092 436 CDD SPRY_Ash2 241 428 - -
Pumo11g02092 436 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 46 435 IPR037353 GO:0048188|GO:0051568
Pumo11g02092 436 MobiDBLite consensus disorder prediction 193 207 - -
Pumo11g02092 436 MobiDBLite consensus disorder prediction 71 88 - -
Pumo11g02092 436 MobiDBLite consensus disorder prediction 105 133 - -
Pumo11g02092 436 SMART SPRY_3 267 428 IPR003877 GO:0005515
Pumo11g02092 436 MobiDBLite consensus disorder prediction 22 40 - -
Pumo11g02092 436 ProSiteProfiles B30.2/SPRY domain profile. 210 429 IPR001870 -
Pumo11g02092 436 MobiDBLite consensus disorder prediction 157 182 - -
Pumo11g02092 436 SUPERFAMILY Concanavalin A-like lectins/glucanases 230 432 IPR013320 -
Pumo11g02092 436 MobiDBLite consensus disorder prediction 22 212 - -
Pumo11g02092 436 FunFam Protein TRAUCO 229 436 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02092 K14964 - gmx:100816796 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02092 11 53066944 53071149 Pumo11g02092 11 53066944 53071149 ECH