Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02063 ATGGGAAGTGGTAGCAGTAATTATTTGAGGTTGGCAATGTTGGTGGTGGCAGGATGTTTAATATATAACACAAAAGAGGTTTCAGCTCAATGTGGAGGAAGTGTTCCAGAAGCTATAGCACAGTGCTCACAGTACGTGCAAAAGTCGGGACCAACGATTCCGCCTTCAGCGGCGTGCTGTGCAGCGCTGAGAAAATTTAATGTGGCATGCGCATGCCAACTCGTTACTAAAGAAGTTGCAAGCCTTGTCAGTATTCCCAAGGTCGTCTTTGTTGGACGCTCTTGTGGTTTGAACCTTCCCGCAGGAATGCAATGCGGAGCTGTTAAAATTCCGCCGAAGGCCATGAAGTGA 351 0.4758 MGSGSSNYLRLAMLVVAGCLIYNTKEVSAQCGGSVPEAIAQCSQYVQKSGPTIPPSAACCAALRKFNVACACQLVTKEVASLVSIPKVVFVGRSCGLNLPAGMQCGAVKIPPKAMK 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02063 116 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 12 113 - -
Pumo11g02063 116 Gene3D - 27 102 IPR036312 -
Pumo11g02063 116 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 35 101 IPR036312 -
Pumo11g02063 116 Pfam Probable lipid transfer 11 105 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02063 Pumo-Chr11 52703180 52704786 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02063 1 111 Acyl Lipid Metabolism Gene Families AT4G33550 39.130 2.02e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02063 - - gmx:112998582 198.364