Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02061 ATGGTGAGAAAGCATGGCTGGCAATTACCTGCTCACACTTTTCAGGTTGTTGCGATCACTGTATTCTGCTTGTTGGTGATTGCTTTCTATGCTTTCCTTGCTCCCTTCATCGGAGGTCCTATATGGGAATACACCTTCATTGCTGTTTACTCTCCTGTGGCACTCACTGTGTTCATTCTTTACGTCAGATGCACTGCAATTAACCCTGCAGATCCGGGCATTATGTCTAAGTTTGACCCTAGAGTGGGAAATAAGTTCAATTCTGCTCATGATTTATCAGGGAAGCATCATGGTTCTGAACATGAACGCATTGCTGCCAGAGAGCAATATTCTCCATCATCTGCTGCTTCCAAAAGGTCTATGACAAATATGAGCAAGAAGAGCTCAGTGGAAGATCTTAACAGAGTAGATAATTCAAGGAAACAGAATAACCGAAACTCATGTAATGTAATTGGAGGAATTTTCTGCATATTATTTTCACATGAAGATTGCCGGAAACAGGAAGCAACGGCTGATGAGCAGGGTGGTGGTGAAGATGCTCTGTTCTGCACTTTGTGCAATGCTGAGGTGCGCAAGTTCAGCAAACATTGTAGAAGTTGTGATAAATGTGTTGATGGCTTCGATCACCATTGTCGGTGGCTTAACAATTGTGTGGGTCACAAAAATTACAGATCTTTTATTGCTCTCATGGCTTTTAGTCTTGCATGGCTAGTTATTGAAGCTGGAGTGGGTGTTGCTGTTTTTGTGCGTTTCTTTGTTAACAAGAGAGGAATGGAATCTGAGATCATTGATAGACTTGGAAATGGATTCTCTCGTCCCCCATTTGCAGCTGTTGTGGTCATATGTACTGTAGTTTCTATCTTGGCTTGTGTGCCTTTGGGTGAGCTTTTCTTTTTCCACATGATACTAATCAGGAAGGGCATCACTACCTATGAATATGTTGTAGCAATGAGAGCCATGAGTGAAGCACCTGCAGGGGCATCTGTAGATGAGGATTTGCCAAATATACTTTACTCTCCAACAGGCTCAGCCACAACTGGATTGAGTGGAGGAAGTTCTCTTGGTTTGCAGTATAAAGGGGCTTGGTGTACCCCTCCTAGGGTATTTGTGGATTATCAGGATGAAGTTGTGCCTCACTTGGAGCCTGGAATGCTACCATCAACTGTTGATCCAGATGCTGCTGGGATTGCAGAAAGAGGGCAAAAGATGCCAAAAAGACCTGTTCGTATTAGTGCTTGGAAGCTTGCTAAGTTGGATTCACAAGAGGCAGTGAGAGCCGCTGCAAAAGCCAGGGCATCTTCTTCAGTTTTGCGACCTGTAGATAACCACCGTCTACCAGATGCAGAATTGAGCTCTAGCGGCAACATGAGCATCAGAAGCAGTTTGAGCACAGAGACTGGAACTAACAAGGAAATAAAACATGAGTTGAGATTATCTCCGGTGAGAAACTCTATTGCTCCTAGTCAAGGAAGTCGTGATGAGTATGAGACTGGAACCCAAAGTATGAGTAGTTTTAGTAGTCCTAGCCATGTTCAAGAGGCAGTTACACTCAGCCCTCTTCCACAGGGTCACAGTTTGGGTGGCTTCAGGGCAGGTACCTCAATTCCTAGTTTGGTGCCTGAGCGTCCTTTAACTTCTAAAGCAACATTGTCAAACTTCAGGAACCCGATATCTAATCCATCTCTTGGATTTGACGGGAGGACAGCAATGCCAAAAGGAATTGGCAATGATCCATTGTTGCTTTCAGCTTCTAACACGTCTATTCTAAGAGATGTGAAACGCACATCAGTTGTTTGGGATCAAGAAGCTGGCAGATATGTTTCGGTTCCTTTATTGCCCTCAGAAGCTCGAATTAGGTCATCCATGCGCATAGAATTGCCAAATGTAAATGCTGAAACAAGCAGTATTGGGAGAAAACCAGTGATTCCTCAGCAGGAGTTGTCATCATCTGCACCCAAGTCTCCAGGGCAGCACATACAGAATCTGATGTATACAGGAGATTCTATCTTTTATGGAGGCCCATTTTTGAGTGCCCCTGTTAAAGATGGTTTGAGAAATGAAAGACATTTGGCATCAACGGATGCCCAAGATGGCAGCATATCAGTGAACTTGCCCCAAGAGCCAAGATATAAAAGGGATTCACTCTCAAATCAGCTTCCTGTGTTTGTCCCTGGTGGGTTTGAGAATACCCTTCAACCTCGTTCTGGCATGAATTAG 2217 0.4407 MVRKHGWQLPAHTFQVVAITVFCLLVIAFYAFLAPFIGGPIWEYTFIAVYSPVALTVFILYVRCTAINPADPGIMSKFDPRVGNKFNSAHDLSGKHHGSEHERIAAREQYSPSSAASKRSMTNMSKKSSVEDLNRVDNSRKQNNRNSCNVIGGIFCILFSHEDCRKQEATADEQGGGEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGHKNYRSFIALMAFSLAWLVIEAGVGVAVFVRFFVNKRGMESEIIDRLGNGFSRPPFAAVVVICTVVSILACVPLGELFFFHMILIRKGITTYEYVVAMRAMSEAPAGASVDEDLPNILYSPTGSATTGLSGGSSLGLQYKGAWCTPPRVFVDYQDEVVPHLEPGMLPSTVDPDAAGIAERGQKMPKRPVRISAWKLAKLDSQEAVRAAAKARASSSVLRPVDNHRLPDAELSSSGNMSIRSSLSTETGTNKEIKHELRLSPVRNSIAPSQGSRDEYETGTQSMSSFSSPSHVQEAVTLSPLPQGHSLGGFRAGTSIPSLVPERPLTSKATLSNFRNPISNPSLGFDGRTAMPKGIGNDPLLLSASNTSILRDVKRTSVVWDQEAGRYVSVPLLPSEARIRSSMRIELPNVNAETSSIGRKPVIPQQELSSSAPKSPGQHIQNLMYTGDSIFYGGPFLSAPVKDGLRNERHLASTDAQDGSISVNLPQEPRYKRDSLSNQLPVFVPGGFENTLQPRSGMN 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02061 738 Pfam DHHC palmitoyltransferase 180 315 IPR001594 GO:0016409
Pumo11g02061 738 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 22 318 - -
Pumo11g02061 738 MobiDBLite consensus disorder prediction 482 512 - -
Pumo11g02061 738 MobiDBLite consensus disorder prediction 89 136 - -
Pumo11g02061 738 MobiDBLite consensus disorder prediction 691 711 - -
Pumo11g02061 738 ProSiteProfiles DHHC domain profile. 181 231 - -
Pumo11g02061 738 MobiDBLite consensus disorder prediction 90 107 - -
Pumo11g02061 738 MobiDBLite consensus disorder prediction 438 512 - -
Pumo11g02061 738 MobiDBLite consensus disorder prediction 448 467 - -
Pumo11g02061 738 MobiDBLite consensus disorder prediction 632 659 - -
Pumo11g02061 738 MobiDBLite consensus disorder prediction 110 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02061 Pumo-Chr11 52685155 52692756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02061 182 312 Lipid Metabolism Gene Families AT4G22750 29.008 1.63e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02061 K20027 - gmx:100814659 1384.39