Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02060 ATGCACACGCTCCTCCGATCCACTCTCAGGACCAAGACCGCTTCATCTTTAGCATATGCCGCTGTTTCCAGAAGTGCTCACGAAAATCTCCTTCAGGCTCCCTTATTGTCTAGATCAAATAGCACGGAGGCTTCCTTGGCAAAGGATAATTCCTCTAATGATGTGAAAAATGGTCAAGGGTTCAAAGGCCATAGTATGCTTGCTCCTTTCACAGCTGGGTGGCAGACTACTGATTTGCATCCTCTGGTCATAGAAAAGTCAGAGGGAAGCTATGTATACGACATTAATGGGAAGAAATATCTTGATGCACTTGCTGGTCTATGGGCCACTGCTTTAGGGGGAAGTGAGCCACGCCTTGTTGATGCTGCCATTGCACAATTAAAGAAGTTGCCATTTTACCATTCCTTTTGGAATCGAACCACATTACCTTCTTTGGATCTAGCCAAGGAACTCCTAGAAATGTTCACAGCCAGAAAAATGGCAAAAGCTTTTTTTGTTAATAGTGGATCAGAAGCCAATGACACTCAGGTGAAACTTGTATGGTATTATAACAATGCACTTGGAAGACCAGATAAGAAGAAATTCATAGCTCGTGCTAAATCGTATCATGGTTCAACATTGATCGCAGCAAGTCTTTCCGGCCTTCCGGCTCTGCATCAAAAATTTGATTTGCCAGCTCCTTTTGTATTGCACACTGACTGTCCACATTACTGGCGGTATCATCTTCCAGGTGAGACAGAGGAAGAATTTTCAACCAGATTAGCCAACAATTTGGAGCAGCTGATTCTGAAAGAGGGACCAGAGACAATTGCTGCATTTATCGCTGAACCTGTAATGGGGGCAGGAGGTGTAATACTTCCACCAGCAACTTATTTTGAGAAGGTCCAAGCTGTTGTCAAGAAGTATGACATTCTTTTTATTGCAGATGAGGTAATCTGTGCCTTTGGAAGGCTTGGGACAATGTTTGGATGTGACAAGTACAACATTAAGCCAGACCTTGTATCCCTGGCTAAGGCACTGTCTTCTGCATATTTGCCAATTGGAGCTGTCCTTGTAAGCCCAGAAGTTTCAGAAGTTATACACACACAAAGCAACAAACTTGGTATATTTTCTCATGGTTTTACTTATTCTGGACACCCTGCAGCCTGTGCCGTTGCAATTGAAGCACTCAAGATCTATAAGGAAAGAAATATTGTTGACCAAGTGAACAAGATCGCCCCAAGGTTCCAAGATGGCATAAAAGCTTTTTCTGACAGTCCCATCATTGGAGAGGTGTATATTATTTTCTGGGTAATTTTAAGAATGCATGACAAACATAACATTATGGGATTTTTGCAGATACGGGGAACTGGCTTGATTCTGGGCACTGAATTCACAGACAACAAGTCACCTAATGATCCGTTTCCTCCTGAATGGGGAGTAGGTGCCTATTTTGGAGCACAATGTGAGAAGCATGGGATGTTAGTTCGTGTATCAGGAGATAACATCATGATGTCTCCACCATATATTATATCTCCAGGAGAAGTTGATGAGTTAATCAGCATTTATGGGAAAGCTTTGAAAGAAACGGAAAAGAAGGTACAGGAGCTCAAGTCTCAGCGCAAGTAG 1608 0.4272 MHTLLRSTLRTKTASSLAYAAVSRSAHENLLQAPLLSRSNSTEASLAKDNSSNDVKNGQGFKGHSMLAPFTAGWQTTDLHPLVIEKSEGSYVYDINGKKYLDALAGLWATALGGSEPRLVDAAIAQLKKLPFYHSFWNRTTLPSLDLAKELLEMFTARKMAKAFFVNSGSEANDTQVKLVWYYNNALGRPDKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYHLPGETEEEFSTRLANNLEQLILKEGPETIAAFIAEPVMGAGGVILPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYLPIGAVLVSPEVSEVIHTQSNKLGIFSHGFTYSGHPAACAVAIEALKIYKERNIVDQVNKIAPRFQDGIKAFSDSPIIGEVYIIFWVILRMHDKHNIMGFLQIRGTGLILGTEFTDNKSPNDPFPPEWGVGAYFGAQCEKHGMLVRVSGDNIMMSPPYIISPGEVDELISIYGKALKETEKKVQELKSQRK 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02060 535 CDD OAT_like 76 520 IPR005814 GO:0008483|GO:0030170
Pumo11g02060 535 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 306 343 IPR005814 GO:0008483|GO:0030170
Pumo11g02060 535 Gene3D - 119 398 IPR015421 GO:0003824
Pumo11g02060 535 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 52 522 - -
Pumo11g02060 535 FunFam Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, probable 116 396 - -
Pumo11g02060 535 FunFam Class III aminotransferase 67 115 - -
Pumo11g02060 535 Pfam Aminotransferase class-III 81 425 IPR005814 GO:0008483|GO:0030170
Pumo11g02060 535 Gene3D Aspartate Aminotransferase, domain 1 66 425 IPR015422 GO:0003824
Pumo11g02060 535 SUPERFAMILY PLP-dependent transferases 66 522 IPR015424 -
Pumo11g02060 535 Coils Coil 513 535 - -
Pumo11g02060 535 Gene3D Aspartate Aminotransferase, domain 1 433 535 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02060 Pumo-Chr11 52658199 52667031 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02060 K16871 - gmx:100815181 986.482