Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02058 ATGGAAGAAGAGACAAAAGTCATATCAGAAGTTCCAGTGACAAAGGTTATTGAGGAGGCGGATCATAAGAATGATAGCATTAAGGAGACAAATGGAGACTTGCCGAGTGAAGTAAAGAAAGAAGAGGAAGAGAATGCCTTTGATGGAGAATTCATTAAAGTTGAGAAAGAAGAGAATGCCGTAGATAATAAGTCCCACAAAACTGAAAGAAGCTCAGATTCTCCTAGCAGAGAATTTCTAGAAGCTCAAGAGAAGATACAGGAACTCGAGGTTGAACTCCAAAGACTAACAGAATCTTTGAAGACCTCTGAGCATGAAAATGATCAGCTGAAGGGAGAGATCTCAGTTACAAAAGAGAAATTGGAGGAAAGTGGGAAGAAATATGAAGAGCTCGATCTGAGTCACAAGAAATTGCAAGAGCAGATTCTTGAGGCTGAGAATAAATATAATCAGCAGCTCGGCACTCTTGAAGAGGCACTGCAAAGTCAAGAAGTGAAGCAGAAAGAGCTTCTTCAAGTGAAGGAAGCATTTGATGGTATCAACGTTGAGCTTGAAAACTCCAAAAAGAGGATGCAGGAATTGCAGGATGAGCTGCAATTTTCAGCAGATGAGGCACGGAAATTCGAGGAGCTGCATAAGCAAAGTGGTTCACACGCTGAATCTGAGGGAAAGAAGGCCTTAGAATTTGAGAGACTACTTGAAGAAGCCAAACTGACTGCAAAAGGAATGGAAGATGAGATGGCTTCCCTTAAGGAAGAATTGAAGGGAGTTTATGACAAGATTGCTGAAAATCAAAAGGTTGAAGAAGCACTTAAAACAACCACAGCAGAACTCTCTACCATCCAAGAGGAGTTGACACTCTCAAAATCCCAGCTATTGGAAGTTGAGAAAAGACTGTCTTCACGGGACTCTTTAGTGGATGAGTTGACCCAGGAATTAAACCTGATAAAGACTTCAGAAACACAGCTAAAGGAAGACATGTTAGCACTTCAAAATCTATTGGCCTCTACAAAGGAAGAACTGCAAGAAAAAAATTCTGAGTCGGAAACTGTAAGGTCCAAGTTGCAGGAGGAGGAAAAATTGAGGGAATCAATTGAAGCTGCACTCAAGAGCCAGGAAGCACAGTTTCTCACTGTACAAGAGGAACTGACTAAACTTAAAACAGAAAAAGAAACTCTTGAAGCAACCGTGGAAGATCTAACCCGTAATTCGAAGAAGTTTGAGGAGCTGTGCGCTGATTTAGAGGAAAAGCTAAAGCTCTCAGATGAAAATTTTCTTAAAACAGATTCTCATTTATCTCGGGCACTTTCAAACAATGCAGAGCTTGAGCAGAAGGTGAAGTCTTTGGAAGATCTCCATAATGAATCAGGAGCTGCTGCAGCTACTGCTACTCAGAGGAGTCTTGAACTTGAGGGACATATTCAGACTTCAATTGCAGCTGCAGAAGAGGCAAAAGCACAATTGAGGGAGCTGGAAACACGCTTCATAGCAGCAGAGCAGAGGAACGTGGAGCTTGAGCAACAATTAAACTTAGTACAATTGAAAACCAGTGATGCTGAGAGAGAAGTGACTGAATTATCTGAGAAAATATCTAATCTCAATGCTAAATTGGAAGAGACCGAGGAAGAGAAGAATCTTCTTAATCGCCAGCTACAGGAGTACACGGAAAAGGTAGCTCAACTTGAATCCGACTTAAATCAATCATCTTTGCGGAGTTCTCAATTAGAGGAGGAGCTGAAGACAGTCAACGACAAATGTGCCGAGCATGAAGACCGAGCCAGTATGAACCATCAGCGTAGCCGAGAACTGGAAGATTTAATCCAGAGCTCTCACTCCAAATTGGAAGATTCTGATAAAAAGGTGAGTGAGTTGGAGTTGTTACTTGAAGCAGAGAAATACAGAATTCAGGAACTTGAACAACAATTAAGCACATTAGAAGAGAAACGTAGTGCTTCAGAAGCGCAAGCTAATAAATACCTAGATGATGTATCTAATCTGACATCAGAACTTGAGGCAATTCAAGCACGAGCCTCAACCCTCGAAATTACACTGCAAGCGGCTAATGAAAGGGGAAAGGAGTTAGAAGATTCTTTGAATGCAGTGACAGAAGAAAAGAAAAAGTTAGAAGATGCTTCTAACAGTTTGAATCAGAAGCTAGCTGAGAAAGAAAATCTATTGGAAATTTTGAGGGATGATTTAAATCTCACACAAGATAAATTGCAGAGCACTGAAAGTGAGCTCAGGGCTGCTGAATTGAGAGAGAGTGAAATAATTGAGAAACTTAAAGCTTCTGAAGAAAATCTTGTCATAAGAGGAAGAGATATAGAGGAGACTGCTGCAAAACACTCAGAACTTCAATCATTGCACGAGTCTCTGTCGAGAGATTCAGAACAGAAACTCCAAGAAGCTATAGAAAAATTCAACAACAGGGATTCTGAGGTTCAGTCCCTGCTTGAGAAAATTAAGATTTTGGAGGAACAGATTGCAAAGGCTGGGGAACAGTCTACATCCTTGAAGAATGAATTCGAAGAGAGTTTGAGCAAACTGGCTTCTTTGGAAAGTGAAAATGAAGATTTGAAACGGCAAATTTTAGAAGCCGAGAGGAAAAGTTCTCAGTCTTTTAGTGAAAATGAATTACTGGTTGGAACAAACGTTCAACTGAAAACCAAGATTGATGAACTTGAGGAATCATTGCTCAGTGCTCTATCGGAGAAGGAAGCCGCTGCTCAAGAACTTTTGTCTCATAAGAACAGTATAGCTGAACTGAATGATTTACAATCAAAATCCTCTGAAATTCAATGTGCAAATGAAGCTCGCATTCTAGAAGTAGAATCACAATTACAAGAAGCATTGCAGAGGCATACTGAGAAGGAATCAGAAACCAAAGAATTGAATGAGGAGCTGAATACACTAGAGGGCCAAATAAAGCTTTTCGAAGAACAGGCTCGTGAAGCAGTTGCAACTTCTGGAACTCATAAAGCTGAACTGGAGGAGAGTCTCATAAAATTAAAGCATCTTGAAACTGTCATTGAGGAACTTCAAAACAAGTCACTCCACCATGTAAAAGAAACTGCAGGGCTAAATGAAGAAAACTCAAAGCTTAATCAGGAAATAGCTAGCTATGAATCCAAATTAAGTGATTTACAGGCGAAGCTCTCTGCAGCACATGTAGAGAAGGAGGAAACAGTTAAAGATCTACTCAGCTTGAAGGATGCCATTGAAGAATTAGGGACAAAGCATAGTGCAGAAGTGCAGACATTAAATTCACAGATATCTTCAGTGATGGATGAGAAGAACTTGCTCAATGAGACTAATCAGGATTTAAAGAAGGAACTTCAGTCTCTGATATTTGACCTTGAAGAGAAGTTGAAGGAACAACAGAAAATTGAAGTCTCACTGAGATCTGAGGTCGAAACCCTCAAAATTGAGATTGCTGAGAAATCTGCATTGCAAAGTCAGCTGGAGGAAATTGAAGGGAAACTGGCAAAAGCTGAATCTAGACTAAACGAAGAGGTTGGAAGTGTTCAAGCTTCTGCTTCTCAAAGAGAAGCAGAATTAAGTTCAAAGTTGGAAGACTATGCACAAAAATTCAATGATAGAAATGTGTTGAATGATAAGGTTGCAGAACTTGAGAAAGAGTTGCAAGTTGCACGGGATGCTATTGCTAACCAGGTATCCCATAAAGGAGCAGAGTCTCAGAAGTTGGAACTAGAGGCAGCCCTGAAGAATTCTCTTGAAGAACTTGAAACTAAGAAAAAGGATATCTCTCTTTTACAGAAACAAGTGACAGATCTAGAGCAGAAATTGCAAGTCGCTGGTGATAAATCCTCAGTAAAGGGTGATGAGGGTGTTGAGCAGAAAGAAGGGTTGGAAGTCAAATCCAGGGACATTGGATCAAACCTCTCGATTCCATCAAAAAGGAAGAGCAAGAAAAAGCCAGAAGCAACAAGTTCTCAAACATCATCCTCATCCGAGACTCATGTTCAAAGTGGTCAGGATTCGCCTGTCATAAATTTCAAGTTCATCTTGGGAGTAGCTCTTGTGTCCATTGTCTTTGGCATAATTCTTGGGAAGCGTTACTAG 4083 0.4041 MEEETKVISEVPVTKVIEEADHKNDSIKETNGDLPSEVKKEEEENAFDGEFIKVEKEENAVDNKSHKTERSSDSPSREFLEAQEKIQELEVELQRLTESLKTSEHENDQLKGEISVTKEKLEESGKKYEELDLSHKKLQEQILEAENKYNQQLGTLEEALQSQEVKQKELLQVKEAFDGINVELENSKKRMQELQDELQFSADEARKFEELHKQSGSHAESEGKKALEFERLLEEAKLTAKGMEDEMASLKEELKGVYDKIAENQKVEEALKTTTAELSTIQEELTLSKSQLLEVEKRLSSRDSLVDELTQELNLIKTSETQLKEDMLALQNLLASTKEELQEKNSESETVRSKLQEEEKLRESIEAALKSQEAQFLTVQEELTKLKTEKETLEATVEDLTRNSKKFEELCADLEEKLKLSDENFLKTDSHLSRALSNNAELEQKVKSLEDLHNESGAAAATATQRSLELEGHIQTSIAAAEEAKAQLRELETRFIAAEQRNVELEQQLNLVQLKTSDAEREVTELSEKISNLNAKLEETEEEKNLLNRQLQEYTEKVAQLESDLNQSSLRSSQLEEELKTVNDKCAEHEDRASMNHQRSRELEDLIQSSHSKLEDSDKKVSELELLLEAEKYRIQELEQQLSTLEEKRSASEAQANKYLDDVSNLTSELEAIQARASTLEITLQAANERGKELEDSLNAVTEEKKKLEDASNSLNQKLAEKENLLEILRDDLNLTQDKLQSTESELRAAELRESEIIEKLKASEENLVIRGRDIEETAAKHSELQSLHESLSRDSEQKLQEAIEKFNNRDSEVQSLLEKIKILEEQIAKAGEQSTSLKNEFEESLSKLASLESENEDLKRQILEAERKSSQSFSENELLVGTNVQLKTKIDELEESLLSALSEKEAAAQELLSHKNSIAELNDLQSKSSEIQCANEARILEVESQLQEALQRHTEKESETKELNEELNTLEGQIKLFEEQAREAVATSGTHKAELEESLIKLKHLETVIEELQNKSLHHVKETAGLNEENSKLNQEIASYESKLSDLQAKLSAAHVEKEETVKDLLSLKDAIEELGTKHSAEVQTLNSQISSVMDEKNLLNETNQDLKKELQSLIFDLEEKLKEQQKIEVSLRSEVETLKIEIAEKSALQSQLEEIEGKLAKAESRLNEEVGSVQASASQREAELSSKLEDYAQKFNDRNVLNDKVAELEKELQVARDAIANQVSHKGAESQKLELEAALKNSLEELETKKKDISLLQKQVTDLEQKLQVAGDKSSVKGDEGVEQKEGLEVKSRDIGSNLSIPSKRKSKKKPEATSSQTSSSSETHVQSGQDSPVINFKFILGVALVSIVFGIILGKRY 1360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02058 1360 MobiDBLite consensus disorder prediction 1271 1331 - -
Pumo11g02058 1360 Coils Coil 621 767 - -
Pumo11g02058 1360 SUPERFAMILY Tropomyosin 414 622 - -
Pumo11g02058 1360 Coils Coil 177 211 - -
Pumo11g02058 1360 Coils Coil 474 592 - -
Pumo11g02058 1360 MobiDBLite consensus disorder prediction 17 80 - -
Pumo11g02058 1360 SUPERFAMILY Tropomyosin 611 851 - -
Pumo11g02058 1360 Coils Coil 1091 1129 - -
Pumo11g02058 1360 Coils Coil 940 988 - -
Pumo11g02058 1360 SUPERFAMILY Tropomyosin 222 444 - -
Pumo11g02058 1360 MobiDBLite consensus disorder prediction 1315 1331 - -
Pumo11g02058 1360 Coils Coil 306 424 - -
Pumo11g02058 1360 Coils Coil 226 260 - -
Pumo11g02058 1360 Coils Coil 877 925 - -
Pumo11g02058 1360 Coils Coil 996 1016 - -
Pumo11g02058 1360 Coils Coil 264 284 - -
Pumo11g02058 1360 PANTHER EARLY ENDOSOME ANTIGEN 1 1360 - -
Pumo11g02058 1360 Coils Coil 1140 1174 - -
Pumo11g02058 1360 Coils Coil 432 459 - -
Pumo11g02058 1360 MobiDBLite consensus disorder prediction 1278 1294 - -
Pumo11g02058 1360 Coils Coil 807 869 - -
Pumo11g02058 1360 Coils Coil 79 166 - -
Pumo11g02058 1360 Coils Coil 1193 1275 - -
Pumo11g02058 1360 Coils Coil 1024 1058 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02058 Pumo-Chr11 52614218 52631527 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02058 - K20283 gmx:100801514 2210.65