Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02052 ATGGGAGAAGTGGCTGAAGCCAAATATTTCATAACAGAAATAGCTCTGCTGAACTACTCGGATGGTACCTTCAAACCCCCACTTTCTCCTCTGTTGATCCACATTGATCCACTCATTCCCAATGGCCACACATCTTCTGGCTCAGAATCTGATCCATCACCCACTTCACTGAATCACCACCAGCAGGAACAACATCCCAAAGATGCGTGGCTTCCAATCACTGAATCCAGAAATGGGAATGCCTATTATGCAGCCTTTCATATTCTTAATTCCAACATTGGATTCCAGGCTCTCATGCTTCCCGTTGCCTTCGCCACTCTTGGTTGGGCATGGGGTACAGTATGTTTGTCAGTAGCATTTGTTTGGCAGCTCTATGCCATATTTCTTCTTGTCCAACTTCACGAATCCGTCCCTGGAATTCGTCACAGCAGATACCTCTTCCTTGCCATGGCTGCCTTCGGTAAAAGGTTAGGGATGGTGGCAGCATTATTCCCGGTAATGTACCTTTCAGGAGGCACATGCGTCATGCTTATCATTACCGGTGGTGGGACCTTGAAACTATTATTCAAGACGCTTTGCGACAACGATCATGGGCAAACATGCAATGCCCACGCACTTAGCGGGGTTGAGTGGTTCTTGGTGTTTACCTGTGTCGCCATTCTCATTGCACAGTTGCCCAACCTCAACTCAATGGCCATGGTTTCTCTCGTCGGTGCCGTCATCTCCATCACTTATTGCACCCTCTTTTGGGTTCTCTCTGTTAAGAACGGTAGGCCTAACAACGTCTCCTATAGCTCATCCCTGACCCATGAATCCACATCACTGGCTAAGATCAATGACGTTCTCAATGCCATTGGACTCATTGTGCTAGCCTTCAGAGGCCATAATGTTTTGCTCGAGATACAGGGGACGCTGCCTTCAAATTTCGAACAAACATCCAAAAAACCAATGCGAAGAGGAGTGAGCATGTCATATGTACTCATTAGCATGTGCGTGTTTCCCCTCGCAATTGCCGGATTCTGGGCATATGGAAACCAGATAAATGGTGGAGGATTGTTATATTCGTTCCCACAATTCCACAAGAAGCAAATAACAAAATTCTCTATGGGTGCAATATATGTTCTGGTAATCATACATTGTTTGACCAGCTACCAAATCTATGCGATGCCTGTTTTTGACAACCTGGAGATAAGATATACCAGCATAAAGAATCAGAAATGTCCACGATTGGTGAGAACATGCATGCGATTATTCTTTGGGGGATTGACATTTTTCATTTCAGTCACGTTCCCATTCCTTCCAAGCCTATCAGCACTACTTGGAAGCATGACCCTGGTGCCCATTACATATGCATACCCCTGTTTCATGTGGTTATCCCTCAAGAAGCCTCGACCAAGAGGTATAGTTTGGTGCTTCAACGTTGCACTCGGTTGCTTAGGGATGCTTCTCAGTGCTCTTTTGGTAGCTGCAGCTATACGGACTCTAGCTGTCAAAGGCCTAAATGCTAACTTCTTCAAACCATAA 1524 0.4573 MGEVAEAKYFITEIALLNYSDGTFKPPLSPLLIHIDPLIPNGHTSSGSESDPSPTSLNHHQQEQHPKDAWLPITESRNGNAYYAAFHILNSNIGFQALMLPVAFATLGWAWGTVCLSVAFVWQLYAIFLLVQLHESVPGIRHSRYLFLAMAAFGKRLGMVAALFPVMYLSGGTCVMLIITGGGTLKLLFKTLCDNDHGQTCNAHALSGVEWFLVFTCVAILIAQLPNLNSMAMVSLVGAVISITYCTLFWVLSVKNGRPNNVSYSSSLTHESTSLAKINDVLNAIGLIVLAFRGHNVLLEIQGTLPSNFEQTSKKPMRRGVSMSYVLISMCVFPLAIAGFWAYGNQINGGGLLYSFPQFHKKQITKFSMGAIYVLVIIHCLTSYQIYAMPVFDNLEIRYTSIKNQKCPRLVRTCMRLFFGGLTFFISVTFPFLPSLSALLGSMTLVPITYAYPCFMWLSLKKPRPRGIVWCFNVALGCLGMLLSALLVAAAIRTLAVKGLNANFFKP 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02052 507 PANTHER OS05G0424000 PROTEIN-RELATED 81 486 - -
Pumo11g02052 507 Pfam Transmembrane amino acid transporter protein 78 492 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02052 Pumo-Chr11 52534167 52538072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02052 60 507 Organic Solute Cotransporters AT1G47670 51.339 2.15e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02052 K26385 - gmx:100817315 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02052 11 52534167 52538072 Pumo11g02052 11 52534167 52538072 ECH