Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02048 ATGGGGAGCGTTTCGTCCGAAGATGGTTCCGACCAGCAGAGCGAGCGTTGCGGGAGTTACAGCCTCAGTGCTGACGTCAGCGAGTCCGAGAGTTGCAGCAGCTTCTCCGCGCGCCGTTTCGACGCCGAGGGAGCTTCCAGCTCAGCCAACCTCTCGCCGCGGCCCCTTGCCGCTCACTTCAGCTTCCCGCCGGCGCAGGTAATGCTTCCCGTCATTGGCGGTAAAGACGTCGTCGTTTGGGATCACAAGCGTGAACTCGATTTGTCCGAAGTGGAAATGATGAAAGAGAGATTCGCTAAGCTGCTTCTCGGAGAAGACATGTCTGGTGGTGGAAAGGGGGTGTGCACTGCGCTTGCAATCTCTAATGCAATAACCAATCTCTCTGCAACTGTGTTTGGCGAACTGTGGAGGTTGGAGCCGCTGGCGCCACAGAAGAAAGCTATGTGGCGTAGAGAAATGGAGTGGTTGTTATGTGTGAGTGATTCAATCGTGGAGTTAGTGCCATCTGTGCAGCAGTTTCCTGGGGGTGGAACCTATGAGGTGATGGCGACGCGGCCTCGCTCGGATTTGTACATCAATCTTCCGGCTCTGAAGAAGCTTGATGGGATGCTGCTTAGTATGCTTGATGGGTTTCACGACACACAGTTTTGGTATGTTGACAGGGGAATTATATTGGGTGATTCCAAGGATTGTGATGCCTATGGTAGACCTTCGGTTAGGCAAGAGGAGAAATGGTGGCTTCCCTCTCCCAAGCTTCCCCCAAATGGCTTGTCCGAGGAAAGTAGGAAAAGGTTGCAGCAGTGTAGGGATTGCACCAATCAGATACTAAAGGCTGCCGTTGCAATTAATACTTCTGTTCTTGCTGAAATGGAAATTCCCGGTGCCTACATTGAATCCTTGCCCAAGAATGGAAAGGCTTGTCTAGGGGATATAATCTATCGATACATAACAGCGGACCAGTTCTCGCCTGAATGTCTCCTTGATTGCCTGGATCTTTCGTCAGAGCACCACACTCAGGATATAGCTAATAGAATTGAGGCTGCTATACATGTATGGAGGCTGAAGGACCATAAGAAACATCTAAGTTCAGCAAAATCCAGACGGTCTTGGGGTGGAAAGGTGAAGGGACTTGTTGCTGACGGTGAAAAGAACAAGAACAATTTTCTTGCCCAACGGGCAGAGACACTTCTAGAAAGCTTGAAACACCGATTTCCAGGGCTCCCTCAGACTGCACTAGATATGGCCAAAATTCAATATAATAAGGATGTTGGACAGTCCATTCTTGAAAGTTATTCAAGAGTGATGGAGAGCTTGGCCTTTAACATAATGGCCAGGATTGATGATGTCATTTATGTAGATGATAGTATAAAGCGATGTGCAGCTGCAGATTCTCTCTCATTGTTCAGCAGGGGAGGTTTTGGTGGCATGCCCATCCAGAAGCGATTCTCTCCTGGTCCCTTCCCAATTCAGCACACCCCATATGCCTCCCCATTTGCAACACCAACGTTCTGTTCCTCCTCTCCTGTCACCGGGAGCCCTTGCAGTCCTGCAAGGACACGTGCTGTCAAGAGGAATGCTCCAAAGGAGGGCGCAGATTTGAAGGCTGAAAAGTTGGCCGCATCTGAGTTTGAGAGAGTTTGGTCATATGCAGGAAACCTCAGTGCAAGAAGAGCGTCTGGCGATGCTCCAGAAAGAGACTGA 1701 0.5003 MGSVSSEDGSDQQSERCGSYSLSADVSESESCSSFSARRFDAEGASSSANLSPRPLAAHFSFPPAQVMLPVIGGKDVVVWDHKRELDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLLSMLDGFHDTQFWYVDRGIILGDSKDCDAYGRPSVRQEEKWWLPSPKLPPNGLSEESRKRLQQCRDCTNQILKAAVAINTSVLAEMEIPGAYIESLPKNGKACLGDIIYRYITADQFSPECLLDCLDLSSEHHTQDIANRIEAAIHVWRLKDHKKHLSSAKSRRSWGGKVKGLVADGEKNKNNFLAQRAETLLESLKHRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVIYVDDSIKRCAAADSLSLFSRGGFGGMPIQKRFSPGPFPIQHTPYASPFATPTFCSSSPVTGSPCSPARTRAVKRNAPKEGADLKAEKLAASEFERVWSYAGNLSARRASGDAPERD 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02048 566 Gene3D PRONE domain, subdomain 1 81 319 - -
Pumo11g02048 566 Gene3D PRONE domain, subdomain 1 320 462 - -
Pumo11g02048 566 FunFam Rop guanine nucleotide exchange factor 14 323 462 - -
Pumo11g02048 566 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 25 466 IPR038937 GO:0005085
Pumo11g02048 566 ProSiteProfiles PRONE domain profile. 81 463 IPR005512 GO:0005085
Pumo11g02048 566 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 89 457 IPR005512 GO:0005085
Pumo11g02048 566 MobiDBLite consensus disorder prediction 1 28 - -
Pumo11g02048 566 FunFam Rop guanine nucleotide exchange factor 1 82 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02048 Pumo-Chr11 52504953 52508678 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02048 - - gmx:100789706 1072.38