Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02043 ATGAGACCTCAGAGAACGTCGATCCACGCCGTCACGACATGGGTGAGGCGACAGCCCCCAAAGGTGAAGGCTTTTCTCGCCGTCGTTTCCGGCATGGCGGCTCTCGTGCTCCTCCGCTTCATCGTCCACGATCACGACAACCTCTTCGTCGCTGCCGAGGCTGTCCACTCCCTCGGAATTTCCGTCCTCATCTATAAGCTCATGAAGGAGAAGACCTGTGCTGGGTTATCACTCAAATCCCAGGAATTAACAGCTATATTTTTAGCTGTTAGGCTGTACTGCAGTTTTGTCATGGAATATGATATCCACACCATACTTGATTTCGCTACTTTCATAACAACACTGTGGGTTATATATATGATTCGTTTTAAGCTGAAGGCTAGTTACATGGAGGAGAAGGATAACTTTGCAATATACTATGTGGTGGTACCCTGTGCTGTGTTAGCCTTGCTTATTCATCCATCAACTTCTCATCATTTATTAAACAGGATTTCCTGGGCATTCTGTGTATATCTGGAAGCCGTCTCAGTCCTGCCCCAACTGCGGGTCATGCAGAACACCAAGATTGTTGAGCCATTCACAGCTCATTACGTATTTGCACTGGGTGTCGCAAGATTCTTGAGCTGTGCTCATTGGGTTCTTCAGGTGTTAGATAGCCGTGGGCATTTGTTGGTGGCCTTGGGGTATGGTTTATGGCCATCAATGGTTCTTATCTCGGAAATCGTCCAGACCTTCATCTTAGCAGATTTCTGTTACTATTATGTCAAAAGTGTATTCGGGGGACAGCTTGTTCTACGTCTTCCCTCTGGAGTGGTGTGA 819 0.4713 MRPQRTSIHAVTTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDFATFITTLWVIYMIRFKLKASYMEEKDNFAIYYVVVPCAVLALLIHPSTSHHLLNRISWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02043 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016020|GO:0046923
Pumo11g02043 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016020|GO:0046923
Pumo11g02043 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016020|GO:0046923
Pumo11g02043 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016020|GO:0046923
Pumo11g02043 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016020|GO:0046923
Pumo11g02043 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 47 270 IPR000133 GO:0006621|GO:0016020|GO:0046923
Pumo11g02043 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016020|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02043 Pumo-Chr11 52471357 52474442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02043 5 272 Miscellaneous Gene Families AT2G21190 89.179 0.0 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02043 - - gmx:100803652 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02043 11 52471357 52474442 Pumo11g02043 11 52471357 52474442 ECH